RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 RTBDNQ9BSG5 229 aaPredicted RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 HINT2Q9BX68 163 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 TMEM222Q9H0R3 208 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 GAR1Q9NY12 217 aaKnown RBP6.51□□□□□ -1.37
TPM1-213ENST00000558400 SIGLEC8Q9NYZ4 499 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 NSG2Q9Y328 171 aa6.51□□□□□ -1.37
TPM1-213ENST00000558400 NDUFB8O95169 186 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 IGKV1-39P01597 117 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 IGKV1D-39P04432 117 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 CLEC3BP05452 202 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 MYOD1P15172 320 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 INPP1P49441 399 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 MECP2P51608 486 aaKnown RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 SUB1P53999 127 aaKnown RBP eCLIP6.5□□□□□ -1.37
TPM1-213ENST00000558400 SYNJ2BPP57105 145 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 SP6Q3SY56 376 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 FAAP20Q6NZ36 180 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 GPHB5Q86YW7 130 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 OR10W1Q8NGF6 305 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 OR1P1Q8NH06 330 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 RNASE11Q8TAA1 199 aaKnown RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 GLYATL2Q8WU03 294 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 GALNT14Q96FL9 552 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 SLC25A21Q9BQT8 299 aaPredicted RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 PDCD10Q9BUL8 212 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 C5orf66Q9H5L9 145 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 ZNF256Q9Y2P7 627 aaPredicted RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 F11RQ9Y624 299 aaKnown RBP6.5□□□□□ -1.37
TPM1-213ENST00000558400 V9GYH0 126 aa6.5□□□□□ -1.37
TPM1-213ENST00000558400 NAP1L6A6NFF2 107 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 CRYM-AS1A6NIL9 109 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 INS-IGF2F8WCM5 200 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 K7EIL1 84 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 LGALS9O00182 355 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 BMPR1BO00238 502 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 IFNA17P01571 189 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 REG1AP05451 166 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 OR5AC1P0C628 307 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 ANXA3P12429 323 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 SNCAP37840 140 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 PRCDQ00LT1 54 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 WT1-ASQ06250 92 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
TPM1-213ENST00000558400 ZNF79Q15937 498 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 CNPY1Q3B7I2 92 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 SPSB3Q6PJ21 355 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 CLEC19AQ6UXS0 136 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 OR2C3Q8N628 320 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 OR52E5Q8NH55 327 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 RBPMSQ93062 196 aaKnown RBP6.49□□□□□ -1.37
TPM1-213ENST00000558400 IL22RA2Q969J5 263 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 PLEKHA3Q9HB20 300 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 TMEM56-RWDD3S4R434 201 aa6.49□□□□□ -1.37
TPM1-213ENST00000558400 A0A0B4J293 547 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 WI2-2373I1.2A0A1W2PRP0 233 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 CENPXA8MT69 81 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 OR2C1O95371 312 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 LY86O95711 162 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 IGKV1-5P01602 117 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 IGLV1-51P01701 117 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 P0C879 139 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 AKR1C4P17516 323 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 ARL3P36405 182 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 SRPXP78539 464 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 TMEM128Q5BJH2 165 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 TRIQKQ629K1 86 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 ZNF57Q68EA5 555 aaPredicted RBP6.48□□□□□ -1.37
TPM1-213ENST00000558400 PLET1Q6UQ28 207 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 LINC00299Q6ZSB3 139 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 SELENOHQ8IZQ5 122 aaKnown RBP6.48□□□□□ -1.37
TPM1-213ENST00000558400 ZNF114Q8NC26 417 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 OR2K2Q8NGT1 345 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 ZNF502Q8TBZ5 544 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 TRIM63Q969Q1 353 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 TXN2Q99757 166 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 PALMDQ9NP74 551 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 ENY2Q9NPA8 101 aa6.48□□□□□ -1.37
TPM1-213ENST00000558400 DBX1A6NMT0 343 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 CORTO00230 105 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 ST8SIA3O43173 380 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 CSN3P07498 182 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 ELLP55199 621 aaPredicted RBP6.47□□□□□ -1.37
TPM1-213ENST00000558400 SPCS3P61009 180 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 DEFA5Q01523 94 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 RBMS2Q15434 407 aaKnown RBP6.47□□□□□ -1.37
TPM1-213ENST00000558400 AARDQ4LEZ3 155 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 TMEM268Q5VZI3 342 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 IL34Q6ZMJ4 242 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 NOXA1Q86UR1 476 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 LGI3Q8N145 548 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 SLC35G3Q8N808 338 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 SCARB1Q8WTV0 552 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 MARC2Q969Z3 335 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 BSCL2Q96G97 398 aaPredicted RBP6.47□□□□□ -1.37
TPM1-213ENST00000558400 CCDC140Q96MF4 163 aa6.47□□□□□ -1.37
TPM1-213ENST00000558400 C7orf50Q9BRJ6 194 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms