RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 SCN3BQ9NY72 215 aa12.91□□□□□ -0.34
TSPAN3-204ENST00000558394 IFNA21P01568 189 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 IFNA17P01571 189 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 FGF2P09038 288 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 ERVK-16P61578 105 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 WT1-ASQ06250 92 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 POU2AF1Q16633 256 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 HACD4Q5VWC8 232 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 ZBTB34Q8NCN2 500 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 LSM10Q969L4 123 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 DGCR14Q96DF8 476 aaKnown RBP12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 CCL28Q9NRJ3 127 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
TSPAN3-204ENST00000558394 IFITM5A6NNB3 132 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 F8W735 103 aaPredicted RBP12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 ST8SIA3O43173 380 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 CTSGP08311 255 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 SPP1P10451 314 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 GNG2P59768 71 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 FABP5Q01469 135 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 MSMO1Q15800 293 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 NUDCD2Q8WVJ2 157 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 OR10C1Q96KK4 312 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 MS4A6AQ9H2W1 248 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 ACOT13Q9NPJ3 140 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 PKD1P98161 4303 aa12.89□□□□□ -0.35
TSPAN3-204ENST00000558394 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 ELOA3CA0A087WX78 387 aaPredicted RBP12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 TEX50A0A1B0GTY4 177 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 K7EIM0 57 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 MYL9P24844 172 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 NPY1RP25929 384 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 OR10A3P58181 314 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 ARPC4P59998 168 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 ZNF767PQ75MW2 155 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 DUSP18Q8NEJ0 188 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 OR13F1Q8NGS4 319 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
TSPAN3-204ENST00000558394 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 FCGR2CP31995 323 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 MFAP4P55083 255 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 ZNF773Q6PK81 442 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 MAPKAPK5-AS1Q8N8E1 139 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 OR51H1Q8NH63 302 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 SLC25A46Q96AG3 418 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 TMEM56Q96MV1 263 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 SLC5A7Q9GZV3 580 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
TSPAN3-204ENST00000558394 AGRNO00468 2067 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 TMEM235A6NFC5 223 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 CASQ2O14958 399 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 SNAPC5O75971 98 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 MLLT11Q13015 90 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 OGFRL1Q5TC84 451 aaPredicted RBP12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 AADACL3Q5VUY0 350 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 MISP3Q96FF7 219 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 NDUFA4L2Q9NRX3 87 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 TMEM14BQ9NUH8 114 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 COMMD9Q9P000 198 aa12.86□□□□□ -0.35
TSPAN3-204ENST00000558394 GNG7O60262 68 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 RAB3BP20337 219 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 C12orf74Q32Q52 190 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 TRPT1Q86TN4 253 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 ZNF414Q96IQ9 312 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 TXN2Q99757 166 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 NXF2Q9GZY0 626 aaKnown RBP12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 TMEM231Q9H6L2 316 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 CLEC5AQ9NY25 188 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 OR51B2Q9Y5P1 312 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 X6R8D5 127 aa12.85□□□□□ -0.35
TSPAN3-204ENST00000558394 TRAV1-2A0A0B4J238 106 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 C16orf90A8MZG2 172 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 SCGNO76038 276 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 PPYP01298 95 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 FXYD4P59646 89 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 C1orf134Q5TEV5 83 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 VCXQ9H320 206 aa12.84□□□□□ -0.35
TSPAN3-204ENST00000558394 IGHV3-66A0A0C4DH42 116 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 MARCH11A6NNE9 402 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 UBE2UQ5VVX9 321 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 Q6ZRM9 215 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 TPRA1Q86W33 373 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 TSPAN14Q8NG11 270 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 MGLLQ99685 303 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 VSIRQ9H7M9 311 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 FKBP11Q9NYL4 201 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 TPRKBQ9Y3C4 175 aa12.83□□□□□ -0.36
TSPAN3-204ENST00000558394 HSPG2P98160 4391 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 CDK2AP2O75956 126 aa12.82□□□□□ -0.36
TSPAN3-204ENST00000558394 C4BPBP20851 252 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms