RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TRAV30A0A087WSZ9 112 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 C5orf67F2Z3F1 127 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 CITED1Q99966 193 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 CD33P20138 364 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 SHANK3Q9BYB0 1731 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 CHD5Q8TDI0 1954 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 AHRRA9YTQ3 701 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 STARD6P59095 220 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H4AP62805 103 aaKnown RBP11.79□□□□□ -0.52
SPG11-210ENST00000558319 FAM216BQ8N7L0 139 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 GATAD1Q8WUU5 269 aa11.79□□□□□ -0.52
SPG11-210ENST00000558319 SHISA3A0PJX4 238 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BKO60814 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BJP06899 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BOP23527 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BBP33778 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 ASIPP42127 132 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BDP58876 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BCP62807 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST2H2BEQ16778 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.78□□□□□ -0.52
SPG11-210ENST00000558319 ORAOV1Q8WV07 137 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 TMEM170AQ8WVE7 144 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BHQ93079 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BNQ99877 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 HIST1H2BMQ99879 126 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 EDA2RQ9HAV5 297 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 SVILO95425 2214 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 PAPPA-AS1Q5QFB9 102 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 ZFAND6Q6FIF0 208 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 LAIR2Q6ISS4 152 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 C1QL2Q7Z5L3 287 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 OR2K2Q8NGT1 345 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 PPIFP30405 207 aaKnown RBP11.78□□□□□ -0.52
SPG11-210ENST00000558319 GPX4P36969 197 aaPredicted RBP11.78□□□□□ -0.52
SPG11-210ENST00000558319 UCNP55089 124 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 SNRPD3P62318 126 aaKnown RBP11.78□□□□□ -0.52
SPG11-210ENST00000558319 TMEM249Q2WGJ8 235 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 CLEC7AQ9BXN2 247 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 TDGF1P13385 188 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 SRSF6Q13247 344 aaKnown RBP11.78□□□□□ -0.52
SPG11-210ENST00000558319 UNQ9370/PRO34162Q6UXP9 181 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 A0A087WWC5 75 aa11.78□□□□□ -0.52
SPG11-210ENST00000558319 RNF222A6NCQ9 220 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 CA7P43166 264 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 FXYD7P58549 80 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 ZNF415Q09FC8 603 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 DMRTC2Q8IXT2 367 aaPredicted RBP11.77□□□□□ -0.52
SPG11-210ENST00000558319 SCARF2Q96GP6 870 aaPredicted RBP11.77□□□□□ -0.52
SPG11-210ENST00000558319 IGHV3-73A0A0B4J1V6 119 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 TPTE2P1Q5T6R2 138 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 ORMDL3Q8N138 153 aa11.77□□□□□ -0.52
SPG11-210ENST00000558319 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 LRTM2Q8N967 370 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 C19orf24Q9BVV8 132 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 F5P12259 2224 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 TPRP12270 2363 aaKnown RBP11.77□□□□□ -0.53
SPG11-210ENST00000558319 UBE2CO00762 179 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 FER1L6-AS1Q8NA97 138 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 ZNF48Q96MX3 618 aaPredicted RBP11.77□□□□□ -0.53
SPG11-210ENST00000558319 TSPOP30536 169 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 GAGE13Q4V321 117 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 OCIAD2Q56VL3 154 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.77□□□□□ -0.53
SPG11-210ENST00000558319 MYOFQ9NZM1 2061 aa11.77□□□□□ -0.53
SPG11-210ENST00000558319 TRAV9-2A0A087WT02 112 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 H3BRM9 83 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 TSPAN7P41732 249 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
SPG11-210ENST00000558319 PDCD11Q14690 1871 aaKnown RBP11.76□□□□□ -0.53
SPG11-210ENST00000558319 GP6Q9HCN6 339 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 CEACAM1P13688 526 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 SLC25A15Q9Y619 301 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 A8MWV9 139 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 FAM181AQ8N9Y4 354 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 FAM168AQ92567 244 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 Q9H3A6 140 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 CRIM1Q9NZV1 1036 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 RP1L1Q8IWN7 2480 aaPredicted RBP11.76□□□□□ -0.53
SPG11-210ENST00000558319 NPIPB11E5RHQ5 1161 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 FMC1Q96HJ9 113 aa11.76□□□□□ -0.53
SPG11-210ENST00000558319 ARHGEF17Q96PE2 2063 aaPredicted RBP11.76□□□□□ -0.53
SPG11-210ENST00000558319 TGFBR3LH3BV60 316 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 GAGE2BQ13066 116 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 ZNF479Q96JC4 524 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 BCORQ6W2J9 1755 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 RREB1Q92766 1687 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 TRAV5A0A0B4J249 113 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 HIST1H2BLQ99880 126 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 TRAV8-1A0A0A6YYK1 113 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 FOXL1Q12952 345 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 OR10J3Q5JRS4 329 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 ASCL4Q6XD76 172 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 FBXL7Q9UJT9 491 aa11.75□□□□□ -0.53
SPG11-210ENST00000558319 C17orf98A8MV24 154 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms