RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 C9JCJ5 164 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 CCL25O15444 150 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 CST7O76096 145 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 NGFP01138 241 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 CCL2P13500 99 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
RTF1-205ENST00000558298 GCH1P30793 250 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 CDKN1AP38936 164 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 FUT6P51993 359 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PRRX1P54821 245 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 FXYD4P59646 89 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 GNB2P62879 340 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PSG7Q13046 419 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PSG3Q16557 428 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 SP6Q3SY56 376 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PHLDA2Q53GA4 152 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 OCIAD2Q56VL3 154 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PSMG4Q5JS54 123 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 FAM78BQ5VT40 261 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 STUMQ69YW2 141 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 FAM71F2Q6NXP2 309 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 GTF2H5Q6ZYL4 71 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 MOB1BQ7L9L4 216 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 C6orf201Q7Z4U5 140 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 TBC1D26Q86UD7 250 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 ZNF525Q8N782 197 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 OR10P1Q8NGE3 313 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 PLPPR1Q8TBJ4 325 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 RNASE8Q8TDE3 154 aaKnown RBP6.64□□□□□ -1.35
RTF1-205ENST00000558298 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 C10orf105Q8TEF2 133 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 Q96MF0 132 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 FOXN4Q96NZ1 517 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 TMEM147Q9BVK8 224 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 ELOVL1Q9BW60 279 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 ST20Q9HBF5 79 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 DYNLRB1Q9NP97 96 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 IL36BQ9NZH7 164 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 C1RLQ9NZP8 487 aa6.64□□□□□ -1.35
RTF1-205ENST00000558298 ANK3Q12955 4377 aaKnown RBP6.64□□□□□ -1.35
RTF1-205ENST00000558298 CD300LBA8K4G0 201 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 NPIPB11E5RHQ5 1161 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 IFNL4K9M1U5 179 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 SLC33A1O00400 549 aaPredicted RBP6.63□□□□□ -1.35
RTF1-205ENST00000558298 LMX1BO60663 402 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 NDUFS7O75251 213 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 TUSC2O75896 110 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 HLA-DRB1P01911 266 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 GPX1P07203 203 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 OR10J4P0C629 311 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 SMIM17P0DL12 118 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 GZMHP20718 246 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 F2RP25116 425 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 TSPOP30536 169 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 GATA4P43694 442 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
RTF1-205ENST00000558298 ZNF154Q13106 437 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 VAMP3Q15836 100 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 RTL8BQ17RB0 113 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 CLEC12BQ2HXU8 276 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 VHLLQ6RSH7 139 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 CLEC2AQ6UVW9 174 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 Q6ZWC4 215 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 FAM57BQ71RH2 274 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 LRP11Q86VZ4 500 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 NIT1Q86X76 327 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 SCCPDHQ8NBX0 429 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 Q8NFD4 153 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 OR4P4Q8NGL7 312 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 SGMS2Q8NHU3 365 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 FAM216AQ8WUB2 273 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 BORCS8Q96FH0 119 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 DNHD1Q96M86 4753 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 UHRF2Q96PU4 802 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 SMR3AQ99954 134 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 CHRDL1Q9BU40 450 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 ABHD14AQ9BUJ0 271 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 PSENENQ9NZ42 101 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 TAAR3PQ9P1P4 343 aa6.63□□□□□ -1.35
RTF1-205ENST00000558298 HIVEP2P31629 2446 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 TRAV9-2A0A087WT02 112 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 TRBV6-6A0A0A6YYG2 114 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 IGKV1-9A0A0C4DH69 117 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 hCG_38984A0A1B0GV85 526 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 TMEM238C9JI98 176 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 F5H5K5 113 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 LILRA1O75019 489 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 HYPMO75409 117 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 IGHV1-46P01743 117 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 PMCHP20382 165 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 CCNOP22674 350 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 MPV17P39210 176 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 RUNX1Q01196 453 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 ZNF90Q03938 601 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 SLC38A11Q08AI6 406 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 RPEL1Q2QD12 228 aa6.62□□□□□ -1.35
RTF1-205ENST00000558298 HLA-DRB5Q30154 266 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms