RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 MRPL32Q9BYC8 188 aaKnown RBP6.79□□□□□ -1.32
SPG11-209ENST00000558253 KRTAP4-8Q9BYQ9 185 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 NDUFA4L2Q9NRX3 87 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 TECRQ9NZ01 308 aaKnown RBP6.79□□□□□ -1.32
SPG11-209ENST00000558253 PITPNC1Q9UKF7 332 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 WASHC3Q9Y3C0 194 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 ARID1AO14497 2285 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 COL6A3P12111 3177 aa6.79□□□□□ -1.32
SPG11-209ENST00000558253 TGIF2-C20orf24A0A0A6YYL0 155 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 TRAV3A0A0B4J244 114 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 SHISA9B4DS77 424 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 H0YJW9 148 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 TCAPO15273 167 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 CXCL1P09341 107 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 GCHFRP30047 84 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 GNG10P50151 68 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 SELENOTP62341 195 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 RPL8P62917 257 aaKnown RBP6.78□□□□□ -1.32
SPG11-209ENST00000558253 HLA-DRB5Q30154 266 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 TMEM155Q4W5P6 130 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 SPINK9Q5DT21 86 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 PYY3Q5JQD4 70 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 CST9LP1Q5W188 147 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 C22orf34Q6ZV56 151 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 VKORC1L1Q8N0U8 176 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 STPG3Q8N7X2 389 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 OR2T10Q8NGZ9 312 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 GATAD1Q8WUU5 269 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 CCL17Q92583 94 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 LEAP2Q969E1 77 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 PLPPR2Q96GM1 343 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 HARBI1Q96MB7 349 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 WFIKKN1Q96NZ8 548 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 PRDM13Q9H4Q3 707 aa6.78□□□□□ -1.32
SPG11-209ENST00000558253 IGHV1-69-2A0A0G2JMI3 117 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 A0A1B0GV90 55 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 C9JCJ5 164 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 GCGP01275 180 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 CHRNB4P30926 498 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 DLX6P56179 175 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 NDUFA6P56556 154 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 NUTF2P61970 127 aaKnown RBP6.77□□□□□ -1.33
SPG11-209ENST00000558253 PAX2Q02962 417 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 CD69Q07108 199 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 C16orf82Q7Z2V1 217 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 LINC01551Q86U37 167 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 TGIF2LXQ8IUE1 241 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 STXBP6Q8NFX7 210 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 OR1L4Q8NGR5 311 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 TMEM170AQ8WVE7 144 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 ST6GALNAC6Q969X2 333 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 NABP2Q9BQ15 211 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 SRSF8Q9BRL6 282 aaKnown RBP6.77□□□□□ -1.33
SPG11-209ENST00000558253 NDUFAF3Q9BU61 184 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 RALYQ9UKM9 306 aaKnown RBP6.77□□□□□ -1.33
SPG11-209ENST00000558253 FUT9Q9Y231 359 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 AMMECR1Q9Y4X0 333 aaPredicted RBP6.77□□□□□ -1.33
SPG11-209ENST00000558253 URGCP-MRPS24S4R325 110 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 CACNA1HO95180 2353 aa6.77□□□□□ -1.33
SPG11-209ENST00000558253 CHD3Q12873 2000 aaKnown RBP6.77□□□□□ -1.33
SPG11-209ENST00000558253 A0A1W2PPE3 182 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 A0A1W2PRE2 83 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 E7EQL1 145 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 CORTO00230 105 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BKO60814 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 MMP23AO75900 390 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 NDUFB4O95168 129 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 TRGC2P03986 189 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BJP06899 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 OR5G3P0C626 314 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 LINC00614P0C842 121 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 LINC00869P0C866 280 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 SAA1P0DJI8 122 aaPredicted RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 ARL14EPLP0DKL9 152 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 RNASE2P10153 161 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BOP23527 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 LOXP28300 417 aaPredicted RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BBP33778 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 CA7P43166 264 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 PPOXP50336 477 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BDP58876 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BCP62807 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 GAGE1Q13065 139 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST2H2BEQ16778 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 COX19Q49B96 90 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 MIC13Q5XKP0 118 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 MMD2Q8IY49 270 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 ST6GALNAC3Q8NDV1 305 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 OR4P4Q8NGL7 312 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 C22orf15Q8WYQ4 148 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 H1FXQ92522 213 aaKnown RBP6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BHQ93079 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BNQ99877 126 aa6.76□□□□□ -1.33
SPG11-209ENST00000558253 HIST1H2BMQ99879 126 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms