RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 DCSTAMPQ9H295 470 aa8.97□□□□□ -0.97
PSEN1-221ENST00000557293 TMEM140Q9NV12 185 aa8.97□□□□□ -0.97
PSEN1-221ENST00000557293 CLEC5AQ9NY25 188 aa8.97□□□□□ -0.97
PSEN1-221ENST00000557293 TRAV2A0A0B4J234 112 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 KNCNA6PVL3 124 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 SSX5O60225 188 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 ARL6IP5O75915 188 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 HPRT1P00492 218 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 IFNA10P01566 189 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 CALRP27797 417 aaKnown RBP8.96□□□□□ -0.98
PSEN1-221ENST00000557293 OR10A3P58181 314 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 PAFAH1B2P68402 229 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 FABP5Q01469 135 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 STHQ8IWL8 128 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 CMTM3Q96MX0 182 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 AIFM2Q9BRQ8 373 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 NXF2Q9GZY0 626 aaKnown RBP8.96□□□□□ -0.98
PSEN1-221ENST00000557293 SCRT2Q9NQ03 307 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 TBC1D24Q9ULP9 559 aa8.96□□□□□ -0.98
PSEN1-221ENST00000557293 NACAE9PAV3 2078 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 I3L2K1 104 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 SULT1C2O00338 296 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 YIF1AO95070 293 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 PTHLHP12272 177 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 NQO2P16083 231 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 MSMO1Q15800 293 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 TMEM41BQ5BJD5 291 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 HACD4Q5VWC8 232 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 THOC7Q6I9Y2 204 aaKnown RBP8.95□□□□□ -0.98
PSEN1-221ENST00000557293 HSD17B13Q7Z5P4 300 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-221ENST00000557293 C8orf59Q8N0T1 100 aaPredicted RBP8.95□□□□□ -0.98
PSEN1-221ENST00000557293 DUSP18Q8NEJ0 188 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 OR1L8Q8NGR8 309 aa8.95□□□□□ -0.98
PSEN1-221ENST00000557293 IGHV3-66A0A0C4DH42 116 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 IFITM5A6NNB3 132 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 K7EQG2 157 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 DNASE2O00115 360 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-221ENST00000557293 CYB5BO43169 146 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 IFNA21P01568 189 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 IFNA17P01571 189 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 CD5P06127 495 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 SPP1P10451 314 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 RELQ04864 619 aaPredicted RBP8.94□□□□□ -0.98
PSEN1-221ENST00000557293 RNF212Q495C1 297 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 SOHLH1Q5JUK2 328 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 TOMM20LQ6UXN7 152 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 C10orf67Q8IYJ2 551 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 NUDCD2Q8WVJ2 157 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 SECTM1Q8WVN6 248 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 UFD1Q92890 307 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 PLEKHA2Q9HB19 425 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 TMEM14BQ9NUH8 114 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 ANXA10Q9UJ72 324 aa8.94□□□□□ -0.98
PSEN1-221ENST00000557293 METTL21EPA6NDL7 271 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 PTGES3LE9PB15 166 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 ST8SIA3O43173 380 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 IGHV3-48P01763 117 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 RANBP1P43487 201 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 MFAP4P55083 255 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 UBE2UQ5VVX9 321 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 CENPSQ8N2Z9 138 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 ZBTB34Q8NCN2 500 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 LSM10Q969L4 123 aaKnown RBP8.93□□□□□ -0.98
PSEN1-221ENST00000557293 SLC25A46Q96AG3 418 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 TXN2Q99757 166 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 ATG5Q9H1Y0 275 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 ZFAND3Q9H8U3 227 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 NSG2Q9Y328 171 aa8.93□□□□□ -0.98
PSEN1-221ENST00000557293 DNAH5Q8TE73 4624 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 TMEM235A6NFC5 223 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 DBX1A6NMT0 343 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 NPY1RP25929 384 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 FCGR2CP31995 323 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 TRAM1Q15629 374 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 CADM3Q8N126 398 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 PACRGLQ8N7B6 248 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 DMBX1Q8NFW5 382 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 OR1P1Q8NH06 330 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 GRAMD2BQ96HH9 432 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 HINT2Q9BX68 163 aa8.92□□□□□ -0.98
PSEN1-221ENST00000557293 TRAV1-2A0A0B4J238 106 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 A0A1B0GU03 582 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 ERICH4A6NGS2 130 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 ARL6IP1Q15041 203 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 ZNF818PQ6ZRF7 136 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 OR13F1Q8NGS4 319 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 DCANP1Q8TF63 244 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 FAM210BQ96KR6 192 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 SLC5A7Q9GZV3 580 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 COMMD9Q9P000 198 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 RABAC1Q9UI14 185 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 OR51B2Q9Y5P1 312 aa8.91□□□□□ -0.98
PSEN1-221ENST00000557293 MT-CO2P00403 227 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 PPYP01298 95 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 ZNF688P0C7X2 276 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 HSMCR30P0CW71 290 aa8.9□□□□□ -0.98
PSEN1-221ENST00000557293 PSMA1P25786 263 aaKnown RBP8.9□□□□□ -0.98
PSEN1-221ENST00000557293 RPL11P62913 178 aaKnown RBP8.9□□□□□ -0.98
PSEN1-221ENST00000557293 ACTL10Q5JWF8 245 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms