RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 ATG101Q9BSB4 218 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 FAAP24Q9BTP7 215 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 RHPN1-AS1Q9BWJ2 59 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 OR51E2Q9H255 320 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 BANF2Q9H503 90 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 SDHAF2Q9NX18 166 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 THYN1Q9P016 225 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 OR1A1Q9P1Q5 309 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 GHRLQ9UBU3 117 aa3.28□□□□□ -1.88
SCFD1-223ENST00000557076 NACAE9PAV3 2078 aa3.28□□□□□ -1.89
SCFD1-223ENST00000557076 TRAV14DV4A0A0A6YYC5 116 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 IGHV7-4-1A0A0J9YVY3 117 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 TEX48A0A1B0GUV7 120 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 MFSD2BA6NFX1 497 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 E9PI62 339 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 DNASE2O00115 360 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CRTAPO75718 401 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CRYZL1O95825 349 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 SCGB1D1O95968 90 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 IFNA5P01569 189 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 AREGP15514 252 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 RPL27AP46776 148 aaKnown RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 SERPINB10P48595 397 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 GBX2P52951 348 aaPredicted RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CCL18P55774 89 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 KRTAP10-1P60331 282 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 ATP6AP1Q15904 470 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 SSX1Q16384 188 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CCDC58Q4VC31 144 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 C10orf55Q5SWW7 151 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 C19orf35Q6ZS72 473 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CADM3Q8N126 398 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 GBGT1Q8N5D6 347 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CANT1Q8WVQ1 401 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 DGCR14Q96DF8 476 aaKnown RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 URB1-AS1Q96HZ7 61 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CYYR1Q96J86 154 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 OR10C1Q96KK4 312 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 NIPSNAP3BQ9BS92 247 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 THTPAQ9BU02 230 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 C20orf24Q9BUV8 137 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 MS4A6AQ9H2W1 248 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 Q9H8V8 135 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 SCPEP1Q9HB40 452 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 CLEC5AQ9NY25 188 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 RDH8Q9NYR8 311 aa3.27□□□□□ -1.89
SCFD1-223ENST00000557076 EXOGQ9Y2C4 368 aaKnown RBP3.27□□□□□ -1.89
SCFD1-223ENST00000557076 IGKV1-6A0A0C4DH72 117 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 A0A1W2PPQ1 181 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 OR2T8A6NH00 312 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF207O43670 478 aaKnown RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 OXTP01178 125 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 PRSS2P07478 247 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 CTSGP08311 255 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 SAA1P0DJI8 122 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 GNB3P16520 340 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 C4BPBP20851 252 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 DUTP33316 252 aaKnown RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 PSMD7P51665 324 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 ERVFC1-1P60608 527 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 NUTF2P61970 127 aaKnown RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 ARFRP1Q13795 201 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 USF2Q15853 346 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 TTC32Q5I0X7 151 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 KDM4DQ6B0I6 523 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF705AQ6ZN79 300 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 C6orf201Q7Z4U5 140 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 LHFPL3Q86UP9 236 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 VSTM2AQ8TAG5 236 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 TMEM167AQ8TBQ9 72 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF414Q96IQ9 312 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 SRSF8Q9BRL6 282 aaKnown RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 UQCC2Q9BRT2 126 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 C1QTNF4Q9BXJ3 329 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 Q9H3A6 140 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 CHMP1AQ9HD42 196 aaPredicted RBP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 Q9N2K0 584 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 PLEKHJ1Q9NW61 149 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 IMPAD1Q9NX62 359 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 CKLFQ9UBR5 152 aa3.26□□□□□ -1.89
SCFD1-223ENST00000557076 PUS1Q9Y606 427 aaKnown RBP eCLIP3.26□□□□□ -1.89
SCFD1-223ENST00000557076 IGKV3-7A0A075B6H7 116 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 IGHV3OR16-8A0A075B7F1 116 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 SNTNA6NMZ2 147 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF705FA8MVS1 300 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 TRDCB7Z8K6 153 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 CYB5BO43169 146 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 KBTBD11O94819 623 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 DIRAS3O95661 229 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF705DP0CH99 300 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 ZNF705BP0CI00 300 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 HTN3P15516 51 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 SRMP19623 302 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 CELP19835 753 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 HTR2CP28335 458 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 GNRHRP30968 328 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 POLR2IP36954 125 aaKnown RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 HLA-DRB3P79483 266 aa3.25□□□□□ -1.89
SCFD1-223ENST00000557076 RELQ04864 619 aaPredicted RBP3.25□□□□□ -1.89
SCFD1-223ENST00000557076 PLA2G7Q13093 441 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms