RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 PRB2P02812 416 aaPredicted RBP8.2□□□□□ -1.1
LINC00239-201ENST00000556973 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 ERHP84090 104 aaKnown RBP8.2□□□□□ -1.1
LINC00239-201ENST00000556973 TMEM187Q14656 261 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 IZUMO4Q1ZYL8 232 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 TMEM128Q5BJH2 165 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 TMEM268Q5VZI3 342 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 SLC25A24Q6NUK1 477 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 RNASE11Q8TAA1 199 aaKnown RBP8.2□□□□□ -1.1
LINC00239-201ENST00000556973 LHFPL5Q8TAF8 219 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 IL22RA2Q969J5 263 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 PDCD10Q9BUL8 212 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 ELOVL1Q9BW60 279 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 BATF3Q9NR55 127 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 DMRT1Q9Y5R6 373 aa8.2□□□□□ -1.1
LINC00239-201ENST00000556973 SAP30O75446 220 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 IFNA17P01571 189 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 IL7P13232 177 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 SUPT4H1P63272 117 aaKnown RBP8.19□□□□□ -1.1
LINC00239-201ENST00000556973 RBMS2Q15434 407 aaKnown RBP8.19□□□□□ -1.1
LINC00239-201ENST00000556973 CNPY1Q3B7I2 92 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 CLEC19AQ6UXS0 136 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 TMED4Q7Z7H5 227 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 OR2C3Q8N628 320 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 OR9G4Q8NGQ1 327 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 OR1P1Q8NH06 330 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 VN1R17PQ8TDU5 208 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 OR4C12Q96R67 309 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 C7orf50Q9BRJ6 194 aaKnown RBP8.19□□□□□ -1.1
LINC00239-201ENST00000556973 PLEKHA3Q9HB20 300 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.19□□□□□ -1.1
LINC00239-201ENST00000556973 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 CACFD1Q9UGQ2 172 aa8.19□□□□□ -1.1
LINC00239-201ENST00000556973 A0A0G2JRQ6 117 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 INS-IGF2F8WCM5 200 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 BMPR1BO00238 502 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 ST8SIA3O43173 380 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 IGHV3-23P01764 117 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 CLEC3BP05452 202 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 MFAP2P55001 183 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 SYNJ2BPP57105 145 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 SRPXP78539 464 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 AARDQ4LEZ3 155 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 Q6ZRM9 215 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 LGI3Q8N145 548 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 SLC35G3Q8N808 338 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 ZNF114Q8NC26 417 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 OR52E5Q8NH55 327 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 S100ZQ8WXG8 99 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 GPR146Q96CH1 333 aa8.18□□□□□ -1.1
LINC00239-201ENST00000556973 A0A0B4J2A0 478 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 LINC00854A0A1B0GVQ3 168 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 MFSD2BA6NFX1 497 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 PPP5D1E7EU14 171 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 NDUFB6O95139 128 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 ARL3P36405 182 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 CCR6P51684 374 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 SUB1P53999 127 aaKnown RBP eCLIP8.17□□□□□ -1.1
LINC00239-201ENST00000556973 SPCS3P61009 180 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
LINC00239-201ENST00000556973 GPHB5Q86YW7 130 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 CENPSQ8N2Z9 138 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 ZNF502Q8TBZ5 544 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 MRAPQ8TCY5 172 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 SCARB1Q8WTV0 552 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 CCDC140Q96MF4 163 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 ATP6V0BQ99437 205 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 CCDC32Q9BV29 185 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 ENY2Q9NPA8 101 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 SIGLEC8Q9NYZ4 499 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 SHPKQ9UHJ6 478 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 S4R3C0 116 aa8.17□□□□□ -1.1
LINC00239-201ENST00000556973 MEGF8Q7Z7M0 2845 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 DUXBA0A1W2PPF3 345 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 WI2-2373I1.2A0A1W2PRP0 233 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 LGALS9O00182 355 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 OR2C1O95371 312 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 SFT2D2O95562 160 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 SULT1A3P0DMM9 295 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 SULT1A4P0DMN0 295 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 VAMP1P23763 118 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 SNCAP37840 140 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 FAM106AQ4KMX7 169 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 SPINK9Q5DT21 86 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 PLET1Q6UQ28 207 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 IL34Q6ZMJ4 242 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 LYZL2Q7Z4W2 148 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 LRTM2Q8N967 370 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 MISP3Q96FF7 219 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 PRR13Q9NZ81 148 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 PTTG2Q9NZH5 202 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 CACNG5Q9UF02 275 aa8.16□□□□□ -1.1
LINC00239-201ENST00000556973 I3L2K1 104 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 K7EIL1 84 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 K7EIM0 57 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 CORTO00230 105 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 PLA2G10O15496 165 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 IGLV1-51P01701 117 aa8.15□□□□□ -1.1
LINC00239-201ENST00000556973 HLA-AP01891 365 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms