RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 HLA-DMBP28068 263 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 CMC4P56277 68 aaPredicted RBP6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 TAS2R31P59538 309 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 ARL6IP1Q15041 203 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 RCN1Q15293 331 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 Q56UQ5 140 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 LEMD1Q68G75 181 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 Q8NAQ8 132 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 TMEM116Q8NCL8 245 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 OR13F1Q8NGS4 319 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 ZNF414Q96IQ9 312 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 MGLLQ99685 303 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 DYNC1H1Q14204 4646 aaKnown RBP6.57□□□□□ -1.36
HNRNPC-227ENST00000556897 TRAV1-2A0A0B4J238 106 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 TEX50A0A1B0GTY4 177 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 SMIM30A4D0T7 59 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 C15orf61A6NNL5 157 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 K7EIM0 57 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 RTL8CO15255 209 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 SSX5O60225 188 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 YIF1AO95070 293 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 HPRT1P00492 218 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 CTSGP08311 255 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 TRAPPC2P0DI81 140 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 TRAPPC2BP0DI82 140 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 RBMY1A1P0DJD3 496 aaKnown RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 RBMY1CP0DJD4 496 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 FCGR2CP31995 323 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 GNG2P59768 71 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 POU2AF1Q16633 256 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 OGFRL1Q5TC84 451 aaPredicted RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 FAM90A2PQ658T7 463 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 ZNF773Q6PK81 442 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 Q6ZTC4 211 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 HSD17B13Q7Z5P4 300 aaPredicted RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 NR2C2APQ86WQ0 139 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 DMBX1Q8NFW5 382 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 DGCR14Q96DF8 476 aaKnown RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 CMTM3Q96MX0 182 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 ATP6V0BQ99437 205 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 HINT2Q9BX68 163 aa6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 F11RQ9Y624 299 aaKnown RBP6.56□□□□□ -1.36
HNRNPC-227ENST00000556897 IGHV4-28A0A0C4DH34 117 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 M0R2N4 97 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 NUPL2O15504 423 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 RGS10O43665 173 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 HNRNPCP07910 306 aaKnown RBP eCLIP6.55□□□□□ -1.363e-7■■□□□ 12.5
HNRNPC-227ENST00000556897 FGF2P09038 288 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 RAB3BP20337 219 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 MYL9P24844 172 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 RELQ04864 619 aaPredicted RBP6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 CATR1Q13166 79 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 MSMO1Q15800 293 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 THOC7Q6I9Y2 204 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 ZBTB34Q8NCN2 500 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 OR1L8Q8NGR8 309 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 OR51H1Q8NH63 302 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 LSM10Q969L4 123 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 CCDC90BQ9GZT6 254 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 SLC5A7Q9GZV3 580 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 DUSP21Q9H596 190 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 PLEKHA2Q9HB19 425 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 NDUFA4L2Q9NRX3 87 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 TPRKBQ9Y3C4 175 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 DNAH17Q9UFH2 4485 aa6.55□□□□□ -1.36
HNRNPC-227ENST00000556897 AGRNO00468 2067 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 TRAV14DV4A0A0A6YYC5 116 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 CASQ2O14958 399 aaPredicted RBP6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 PPYP01298 95 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 NAT1P18440 290 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 FXYD4P59646 89 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 DEFB131AP59861 70 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 ARPC4P59998 168 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 PAFAH1B2P68402 229 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 NDUFA5Q16718 116 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 AADACL3Q5VUY0 350 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 PVRIGQ6DKI7 326 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 TCF24Q7RTU0 167 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 FAM24BQ8N5W8 94 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 POM121L12Q8N7R1 296 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 BEST4Q8NFU0 473 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 GIMAP1Q8WWP7 306 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 SLC25A46Q96AG3 418 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 MS4A6AQ9H2W1 248 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 NSG2Q9Y328 171 aa6.54□□□□□ -1.36
HNRNPC-227ENST00000556897 IGHV3-66A0A0C4DH42 116 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 DNASE2O00115 360 aaPredicted RBP6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 RGS13O14921 159 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 DFFBO76075 338 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 IGHV3-48P01763 117 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 FCER2P06734 321 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 MIFP14174 115 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 ERVK-16P61578 105 aa6.53□□□□□ -1.36
HNRNPC-227ENST00000556897 RPL11P62913 178 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms