RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PHLDA2Q53GA4 152 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 RNASE10Q5GAN6 216 aaKnown RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 GPR107Q5VW38 600 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 DGAT2L7PQ6IED9 249 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SLC25A24Q6NUK1 477 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 PLET1Q6UQ28 207 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 IL34Q6ZMJ4 242 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 H2BFWTQ7Z2G1 175 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 HAPLN4Q86UW8 402 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 LAX1Q8IWV1 398 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 CADM3Q8N126 398 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR4A16Q8NH70 328 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 RCHY1Q96PM5 261 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 FAM212BQ9NTI7 297 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-222ENST00000556768 ANAPC10Q9UM13 185 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 OR51B2Q9Y5P1 312 aa5.58□□□□□ -1.52
SCFD1-222ENST00000556768 SORL1Q92673 2214 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 LGALS9O00182 355 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 NDUFB8O95169 186 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 IGHV3-23P01764 117 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 HLA-AP01891 365 aaKnown RBP5.57□□□□□ -1.52
SCFD1-222ENST00000556768 FOLR2P14207 255 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 TBPP20226 339 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 PTBP1P26599 531 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCFD1-222ENST00000556768 G6PCP35575 357 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 GUCA2BQ16661 112 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 ANKRD55Q3KP44 614 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 SLC16A13Q7RTY0 426 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 GDPD1Q8N9F7 314 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 OR5B3Q8NH48 314 aa5.57□□□□□ -1.52
SCFD1-222ENST00000556768 LSM10Q969L4 123 aaKnown RBP5.57□□□□□ -1.52
SCFD1-222ENST00000556768 MRPS26Q9BYN8 205 aaKnown RBP5.57□□□□□ -1.52
SCFD1-222ENST00000556768 GAR1Q9NY12 217 aaKnown RBP5.57□□□□□ -1.52
SCFD1-222ENST00000556768 IGLV11-55A0A075B6I3 123 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 TRAV3A0A0B4J244 114 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 TEX50A0A1B0GTY4 177 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 IGLC7A0M8Q6 106 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 A8MZ25 164 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 C3orf84H3BNL1 204 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 NOL3O60936 208 aaKnown RBP5.56□□□□□ -1.52
SCFD1-222ENST00000556768 GABARAPO95166 117 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 MYOD1P15172 320 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 CBLN1P23435 193 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 MRPS10P82664 201 aaKnown RBP5.56□□□□□ -1.52
SCFD1-222ENST00000556768 CTF1Q16619 201 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 CD300EQ496F6 205 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-222ENST00000556768 RBPMS2Q6ZRY4 209 aaKnown RBP5.56□□□□□ -1.52
SCFD1-222ENST00000556768 TBC1D26Q86UD7 250 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 ARRDC1Q8N5I2 433 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 ZFAND1Q8TCF1 268 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 VN1R17PQ8TDU5 208 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 MARC2Q969Z3 335 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF486Q96H40 463 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-222ENST00000556768 SPATA25Q9BR10 227 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 NDUFA4L2Q9NRX3 87 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 EXTL2Q9UBQ6 330 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 KLK11Q9UBX7 282 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 UFC1Q9Y3C8 167 aa5.56□□□□□ -1.52
SCFD1-222ENST00000556768 C2orf70A6NJV1 201 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 PLA2G1BP04054 148 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 GPR183P32249 361 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 CD81P60033 236 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 ERHP84090 104 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 KLK9Q2XQG4 91 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 DEFB114Q30KQ6 69 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF57Q68EA5 555 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 SPSB3Q6PJ21 355 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 OR10W1Q8NGF6 305 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 BSCL2Q96G97 398 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 PDCD10Q9BUL8 212 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 COPZ2Q9P299 210 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RABL2AQ9UBK7 228 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 KLK9Q9UKQ9 250 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RABL2BQ9UNT1 228 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 NSG2Q9Y328 171 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 S4R3C0 116 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 A0A1B0GW64 132 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 B3GALNT1O75752 331 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 CD3DP04234 171 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 SNCAP37840 140 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 AKR1C2P52895 323 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 PIGPP57054 158 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 TAS2R19P59542 299 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RPP30P78346 268 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 SSBP1Q04837 148 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 SCGB2B2Q4G0G5 96 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 ZNF585BQ52M93 769 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 LAMTOR1Q6IAA8 161 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 C19orf35Q6ZS72 473 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 CCDC71LQ8N9Z2 235 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 UBAC2Q8NBM4 344 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 UXS1Q8NBZ7 420 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 OR52I2Q8NH67 350 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 TERB2Q8NHR7 220 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RNASE11Q8TAA1 199 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RAB2BQ8WUD1 216 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 RRNAD1Q96FB5 475 aaKnown RBP5.55□□□□□ -1.52
SCFD1-222ENST00000556768 ATP6V0BQ99437 205 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 NEURL2Q9BR09 285 aa5.55□□□□□ -1.52
SCFD1-222ENST00000556768 FXYD6Q9H0Q3 95 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms