RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 TMEM230Q96A57 120 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 PRRT1Q99946 306 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 B9D2Q9BPU9 175 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 THAP7Q9BT49 309 aaPredicted RBP7.89□□□□□ -1.15
SNX6-208ENST00000556712 NAA60Q9H7X0 242 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 PRR13Q9NZ81 148 aa7.89□□□□□ -1.15
SNX6-208ENST00000556712 SORL1Q92673 2214 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 A0A0B4J293 547 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 IGHV3-35A0A0C4DH35 117 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 TEX13DA0A0J9YY54 714 aaPredicted RBP7.88□□□□□ -1.15
SNX6-208ENST00000556712 IZUMO1RA6ND01 250 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 ZNF701M0R085 212 aaPredicted RBP7.88□□□□□ -1.15
SNX6-208ENST00000556712 SURF2Q15527 256 aaPredicted RBP7.88□□□□□ -1.15
SNX6-208ENST00000556712 TATDN3Q17R31 274 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 HSD17B13Q7Z5P4 300 aaPredicted RBP7.88□□□□□ -1.15
SNX6-208ENST00000556712 Q8N402 240 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 RNASE11Q8TAA1 199 aaKnown RBP7.88□□□□□ -1.15
SNX6-208ENST00000556712 ZNF502Q8TBZ5 544 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 CXorf58Q96LI9 332 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 TMEM56Q96MV1 263 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 ASCL2Q99929 193 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 SLC2A8Q9NY64 477 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 FKBP11Q9NYL4 201 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
SNX6-208ENST00000556712 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 OR2T8A6NH00 312 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 CRYM-AS1A6NIL9 109 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 C2orf70A6NJV1 201 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 K7EIM0 57 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 ST8SIA3O43173 380 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 CLEC3BP05452 202 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 DCTN2Q13561 401 aaKnown RBP7.87□□□□□ -1.15
SNX6-208ENST00000556712 FAM209BQ5JX69 171 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 UNQ9165/PRO28630Q6UXU0 137 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 Q6ZRM9 215 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 OR2C3Q8N628 320 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 UBAC2Q8NBM4 344 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 GLYATL2Q8WU03 294 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 MISP3Q96FF7 219 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 TMEM222Q9H0R3 208 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 PLEKHA3Q9HB20 300 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 THYN1Q9P016 225 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 SMAD5-AS1Q9Y6J3 95 aa7.87□□□□□ -1.15
SNX6-208ENST00000556712 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 TMEM213A2RRL7 107 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 F8W735 103 aaPredicted RBP7.86□□□□□ -1.15
SNX6-208ENST00000556712 CYB5BO43169 146 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 NXPH3O95157 252 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 IGHV3-48P01763 117 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 HOXA1P49639 335 aaPredicted RBP7.86□□□□□ -1.15
SNX6-208ENST00000556712 HSPE1P61604 102 aaKnown RBP7.86□□□□□ -1.15
SNX6-208ENST00000556712 TMEM268Q5VZI3 342 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 PLET1Q6UQ28 207 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 SELENOHQ8IZQ5 122 aaKnown RBP7.86□□□□□ -1.15
SNX6-208ENST00000556712 TOMM5Q8N4H5 51 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 SLC35G3Q8N808 338 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 VN1R17PQ8TDU5 208 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 DYNLRB2Q8TF09 96 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 CHRDL1Q9BU40 450 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 SRRQ9GZT4 340 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 C21orf62Q9NYP8 219 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 SCP2D1Q9UJQ7 156 aa7.86□□□□□ -1.15
SNX6-208ENST00000556712 IGHV3OR16-8A0A075B7F1 116 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 ZNF320A2RRD8 509 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 A8MWP6 167 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 LGALS9O00182 355 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 TGOLN2O43493 480 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 ATG12O94817 140 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 CDS2O95674 445 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 IFNA17P01571 189 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 FOLR2P14207 255 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 AKR1C4P17516 323 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 FAUP35544 74 aaKnown RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 ETV6P41212 452 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 SUPT4H1P63272 117 aaKnown RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 CD300EQ496F6 205 aaPredicted RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 Q56UQ5 140 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 SPANXN2Q5MJ10 180 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 GPHB5Q86YW7 130 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 SGPP2Q8IWX5 399 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 ZNF114Q8NC26 417 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 OR1P1Q8NH06 330 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 SCARB1Q8WTV0 552 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 RBPMSQ93062 196 aaKnown RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 PINX1Q96BK5 328 aaKnown RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 GPR146Q96CH1 333 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 RRNAD1Q96FB5 475 aaKnown RBP7.85□□□□□ -1.15
SNX6-208ENST00000556712 PDCD10Q9BUL8 212 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 CACNG5Q9UF02 275 aa7.85□□□□□ -1.15
SNX6-208ENST00000556712 I3L2K1 104 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 B3GALNT1O75752 331 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 MT-CO2P00403 227 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 FRMD6-AS1P0C7T7 363 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 ADMP35318 185 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 AP3S2P59780 193 aa7.84□□□□□ -1.15
SNX6-208ENST00000556712 DHODHQ02127 395 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms