RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 SPNS3Q6ZMD2 512 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 MIR17HGQ75NE6 70 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 OR1L8Q8NGR8 309 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 RAB1CQ92928 201 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 DERL1Q9BUN8 251 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 SIRT7Q9NRC8 400 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 FKBP11Q9NYL4 201 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 SLC45A2Q9UMX9 530 aa8.17□□□□□ -1.1
TMEM260-211ENST00000556648 YTHDF2Q9Y5A9 579 aaKnown RBP8.17□□□□□ -1.1
TMEM260-211ENST00000556648 PPIAL4CA0A0B4J2A2 164 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM250H0YL14 139 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 PPIAL4GP0DN37 164 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 USF1P22415 310 aaPredicted RBP8.16□□□□□ -1.1
TMEM260-211ENST00000556648 OR10J1P30954 320 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
TMEM260-211ENST00000556648 UQCRFS1P47985 274 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 LGALS4P56470 323 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM241Q24JQ0 296 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 HLA-DRB5Q30154 266 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 C16orf82Q7Z2V1 217 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 OR2T6Q8NHC8 308 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 PRORYQ9H606 182 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 ONECUT1Q9UBC0 465 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 SPTBN4Q9H254 2564 aa8.16□□□□□ -1.1
TMEM260-211ENST00000556648 B4DEV8 164 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 GCHFRP30047 84 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 LDLRAD2Q5SZI1 272 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 SLC16A13Q7RTY0 426 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 NECAP1Q8NC96 275 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 OR5T1Q8NG75 326 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 PCGF1Q9BSM1 259 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 FNDC4Q9H6D8 234 aaPredicted RBP8.15□□□□□ -1.1
TMEM260-211ENST00000556648 AURKAIP1Q9NWT8 199 aaPredicted RBP8.15□□□□□ -1.1
TMEM260-211ENST00000556648 MRPL36Q9P0J6 103 aaKnown RBP8.15□□□□□ -1.1
TMEM260-211ENST00000556648 DCHS2Q6V1P9 2916 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 SPTA1P02549 2419 aa8.15□□□□□ -1.1
TMEM260-211ENST00000556648 A0A1W2PPI3 338 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 C5orf52A6NGY3 159 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 FNDC10F2Z333 226 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 DLL1O00548 723 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 CXorf1O96002 111 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 APELAP0DMC3 54 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 IL3RAP26951 378 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 RND2P52198 227 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 CD69Q07108 199 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 TMEM249Q2WGJ8 235 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 RUSC1-AS1Q66K80 236 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 PNKDQ8N490 385 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 ZNF114Q8NC26 417 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 OR8B3Q8NGG8 313 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 OR4P4Q8NGL7 312 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 OR4A5Q8NH83 315 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 OR8B2Q96RD0 313 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 ELOVL1Q9BW60 279 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 CLEC7AQ9BXN2 247 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 KCNIP2Q9NS61 270 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 CBLN4Q9NTU7 201 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 PRELID1Q9Y255 219 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.11
TMEM260-211ENST00000556648 HRNRQ86YZ3 2850 aaPredicted RBP8.15□□□□□ -1.11
TMEM260-211ENST00000556648 COL6A6A6NMZ7 2263 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 IGHV1-3A0A0C4DH29 117 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 CXorf65A6NEN9 183 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 PGPEP1LA6NFU8 196 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 BUB1B-PAK6H3BSN5 160 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 KLRD1Q13241 179 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 VMA21Q3ZAQ7 101 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 UNQ6494/PRO21346Q6UXR6 183 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 ACY3Q96HD9 319 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 RAB1BQ9H0U4 201 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 ANKHD1Q8IWZ3 2542 aaKnown RBP8.14□□□□□ -1.11
TMEM260-211ENST00000556648 LRBAP50851 2863 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 ARHGAP32A7KAX9 2087 aa8.14□□□□□ -1.11
TMEM260-211ENST00000556648 A0A1W2PN81 502 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 CLDN34H7C241 214 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 NDUFB4O95168 129 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 CHRNA7P36544 502 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 RHOBP62745 196 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 ERHP84090 104 aaKnown RBP8.13□□□□□ -1.11
TMEM260-211ENST00000556648 RAB31Q13636 194 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 FBLN7Q53RD9 439 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 FAM78BQ5VT40 261 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 VSTM2AQ8TAG5 236 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 C8orf46Q8TAG6 207 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 ZNF503Q96F45 646 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 NBASA2RRP1 2371 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 INS-IGF2F8WCM5 200 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 NDUFS7O75251 213 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 FSTL3O95633 263 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 IGHV2-5P01817 119 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 CRYGBP07316 175 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 AREGP15514 252 aa8.13□□□□□ -1.11
TMEM260-211ENST00000556648 MC5RP33032 325 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms