RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FAM90A2PQ658T7 463 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 SP5Q6BEB4 398 aaPredicted RBP5.06□□□□□ -1.6
TDP1-215ENST00000556498 FAM166AQ6J272 317 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 SLC25A47Q6Q0C1 308 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 PRSS45Q7RTY3 260 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 MRPL55Q7Z7F7 128 aaKnown RBP5.06□□□□□ -1.6
TDP1-215ENST00000556498 TEX45Q8NA69 505 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 OR8B3Q8NGG8 313 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 OR2AJ1Q8NGZ0 328 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 CLDND2Q8NHS1 167 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 TMEM255BQ8WV15 326 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 RND1Q92730 232 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 SLC25A44Q96H78 314 aaPredicted RBP5.06□□□□□ -1.6
TDP1-215ENST00000556498 C8orf49Q96NF6 230 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 OR8B2Q96RD0 313 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 C1QTNF5Q9BXJ0 243 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 SCRT2Q9NQ03 307 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 DNAJC15Q9Y5T4 150 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 NUP188Q5SRE5 1749 aa5.06□□□□□ -1.6
TDP1-215ENST00000556498 ZFC3H1O60293 1989 aaKnown RBP5.05□□□□□ -1.6
TDP1-215ENST00000556498 DOCK1Q14185 1865 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 TRBV20-1A0A075B6N2 111 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 TRBV5-3A0A0A0MS03 114 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
TDP1-215ENST00000556498 ZNF732B4DXR9 585 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 J3QQQ9 107 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 EDIL3O43854 480 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 CXCL13O43927 109 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 NUPR1O60356 82 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 IGHV3-7P01780 117 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 CRYGSP22914 178 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 FCGR2CP31995 323 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 VGLL4Q14135 290 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 LY6KQ17RY6 165 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 ZNF718Q3SXZ3 478 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 SPRNQ5BIV9 151 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 RNASE12Q5GAN4 147 aaKnown RBP5.05□□□□□ -1.6
TDP1-215ENST00000556498 NMSQ5H8A3 153 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 ZNF678Q5SXM1 525 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 NPWQ8N729 165 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 FAM213BQ8TBF2 198 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 STAG3L4Q8TBR4 150 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 BADQ92934 168 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 GPR21Q99679 349 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 GNB1LQ9BYB4 327 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 KCNIP2Q9NS61 270 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 CACNG5Q9UF02 275 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 VSIG4Q9Y279 399 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 TMED7Q9Y3B3 224 aa5.05□□□□□ -1.6
TDP1-215ENST00000556498 CHD3Q12873 2000 aaKnown RBP5.05□□□□□ -1.6
TDP1-215ENST00000556498 PARP14Q460N5 1801 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 TJP1Q07157 1748 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 A8MT66 165 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 E9PLD3 99 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 C11orf98E9PRG8 122 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 H7C1H1 209 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 OR5AL1P0C617 328 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 IL3RAP26951 378 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 PFN2P35080 140 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 FOXA3P55318 350 aaPredicted RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 PRDX1Q06830 199 aaKnown RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 EIF3IQ13347 325 aaKnown RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 ELOCQ15369 112 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 OR1C1Q15619 314 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 DMKNQ6E0U4 476 aaPredicted RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 TCF23Q7RTU1 214 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 HSD11B1LQ7Z5J1 315 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 RPS19BP1Q86WX3 136 aaKnown RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 C11orf53Q8IXP5 236 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 SLC25A45Q8N413 288 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 ANKRD29Q8N6D5 301 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 OR10AC1Q8NH08 325 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 IGFBPL1Q8WX77 278 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 NPIPB3Q92617 1050 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 PGLYRP3Q96LB9 341 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 LINC00479Q96M42 142 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 Q96MF0 132 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 AMELYQ99218 206 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 TMEM147Q9BVK8 224 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 KRTAP3-1Q9BYR8 98 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 WRAP73Q9P2S5 460 aaPredicted RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 ZNF835Q9Y2P0 537 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 PYGO1Q9Y3Y4 419 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 RREB1Q92766 1687 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 PDCD11Q14690 1871 aaKnown RBP5.04□□□□□ -1.6
TDP1-215ENST00000556498 MICAL3Q7RTP6 2002 aa5.04□□□□□ -1.6
TDP1-215ENST00000556498 BAZ2AQ9UIF9 1905 aaKnown RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 SBF1O95248 1867 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 ITGB4P16144 1822 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 AFDNP55196 1824 aaKnown RBP5.03□□□□□ -1.6
TDP1-215ENST00000556498 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 LOC107986453A0A1B0GWG9 222 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 A0A1W2PS18 150 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 FAM24AA6NFZ4 105 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 M0R1B8 84 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 FCN1O00602 326 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 C1orf105O95561 183 aa5.03□□□□□ -1.6
TDP1-215ENST00000556498 IGHG2P01859 326 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms