RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 VWC2LB2RUY7 222 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 C9JQL5 133 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 VENTXO95231 258 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 OPRK1P41145 380 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 ATP5J2P56134 94 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 ARSJQ5FYB0 599 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-205ENST00000556096 FFAR4Q5NUL3 377 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 CCDC144NLQ6NUI1 221 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 LHFPL4Q7Z7J7 247 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
VPS33B-205ENST00000556096 RPP25LQ8N5L8 163 aaKnown RBP11.8□□□□□ -0.52
VPS33B-205ENST00000556096 PERPQ96FX8 193 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 NOTCH2Q04721 2471 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 ARHGAP32A7KAX9 2087 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 A0A1B0GV50 99 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 RBFOX3A6NFN3 312 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 TOX4O94842 621 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 IGKV1D-33P01593 117 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 IGKV1-33P01594 117 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 SFTA3P0C7M3 94 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 M6PRP20645 277 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 CNTFRP26992 372 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 ACOT6Q3I5F7 207 aaPredicted RBP11.8□□□□□ -0.52
VPS33B-205ENST00000556096 CLEC2AQ6UVW9 174 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 PPP1R27Q86WC6 154 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 C1orf159Q96HA4 380 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 METTL1Q9UBP6 276 aaKnown RBP11.8□□□□□ -0.52
VPS33B-205ENST00000556096 HILPDAQ9Y5L2 63 aa11.8□□□□□ -0.52
VPS33B-205ENST00000556096 SCO1O75880 301 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 GPX4P36969 197 aaPredicted RBP11.79□□□□□ -0.52
VPS33B-205ENST00000556096 UBE2E1P51965 193 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
VPS33B-205ENST00000556096 LGALS4P56470 323 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 DEFA5Q01523 94 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 WT1-ASQ06250 92 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 PMS2P11Q13670 270 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 HNF4GQ14541 408 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 C10orf55Q5SWW7 151 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 TEPPQ6URK8 271 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 SVBPQ8N300 66 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 OR10G4Q8NGN3 311 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 OR10G9Q8NGN4 311 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 OR10G7Q8NGN6 311 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 CACNG8Q8WXS5 425 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 TBX15Q96SF7 602 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 MGST2Q99735 147 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 KCNIP2Q9NS61 270 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 TBL2Q9Y4P3 447 aaKnown RBP11.79□□□□□ -0.52
VPS33B-205ENST00000556096 TNCP24821 2201 aa11.79□□□□□ -0.52
VPS33B-205ENST00000556096 CTXND1A0A1B0GTU2 59 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 ACTL6BO94805 426 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 MOSP00540 346 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
VPS33B-205ENST00000556096 COMPP49747 757 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-205ENST00000556096 RAB31Q13636 194 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 TMEM144Q7Z5S9 345 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 NPBQ8NG41 125 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 RNASEH2CQ8TDP1 164 aaKnown RBP11.78□□□□□ -0.52
VPS33B-205ENST00000556096 GGTLC1Q9BX51 225 aa11.78□□□□□ -0.52
VPS33B-205ENST00000556096 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
VPS33B-205ENST00000556096 MAP1LC3B2A6NCE7 125 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 CYB5BO43169 146 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 DSCR9P59020 149 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 CD69Q07108 199 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 TNXAQ16473 311 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 ZNF506Q5JVG8 444 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 LCN15Q6UWW0 184 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 SSX7Q7RTT5 188 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 MAP1LC3BQ9GZQ8 125 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 SLC35B3Q9H1N7 401 aa11.77□□□□□ -0.52
VPS33B-205ENST00000556096 AKAP9Q99996 3911 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 A0A1W2PRD5 423 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 A0A1W2PRF3 423 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 A0A1W2PRM7 423 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 IGLC7A0M8Q6 106 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 NDUFA3O95167 84 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 OR13C7P0DN81 318 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 EBI3Q14213 229 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 DEFB113Q30KQ7 82 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 KHDC3LQ587J8 217 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 PVRIGQ6DKI7 326 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 OR2T10Q8NGZ9 312 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 MALSU1Q96EH3 234 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 P2RX4Q99571 388 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 RARRES2Q99969 163 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 FBXL15Q9H469 300 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.53
VPS33B-205ENST00000556096 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 SEC14L6B5MCN3 397 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 NBR2O15453 112 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 SNRNP70P08621 437 aaKnown RBP11.76□□□□□ -0.53
VPS33B-205ENST00000556096 RPL29P47914 159 aaKnown RBP11.76□□□□□ -0.53
VPS33B-205ENST00000556096 PPT1P50897 306 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 PAX8Q06710 450 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 GAMTQ14353 236 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 SSX2Q16385 188 aa11.76□□□□□ -0.53
VPS33B-205ENST00000556096 ATRAIDQ6UW56 229 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms