RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CGB1A6NKQ9 187 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 FAM223BA6NKX1 122 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 NUDT19A8MXV4 375 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 E7EUB6 86 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 SOX15O60248 233 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 PITX3O75364 302 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 CD28P10747 220 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 AREGP15514 252 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 CTRB1P17538 263 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 NKX2-1P43699 371 aaPredicted RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 RAB9AP51151 201 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 ATP5IP56385 69 aaPredicted RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 RPP30P78346 268 aaKnown RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 WT1-ASQ06250 92 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 PDLIM3Q53GG5 364 aaPredicted RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 ASPHD1Q5U4P2 390 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 CTRB2Q6GPI1 263 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 NDUFA11Q86Y39 141 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 FAM223AQ8IWN6 122 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 OR2C3Q8N628 320 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 C11orf44Q8N8P7 122 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 NECAP1Q8NC96 275 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 OR10W1Q8NGF6 305 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 OR1P1Q8NH06 330 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 UBE2E2Q96LR5 201 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 C2orf50Q96LR7 162 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 MS4A10Q96PG2 267 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 CITED1Q99966 193 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 CITED2Q99967 270 aaPredicted RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 MED28Q9H204 178 aa5.97□□□□□ -1.45
TDP1-214ENST00000556063 F11RQ9Y624 299 aaKnown RBP5.97□□□□□ -1.45
TDP1-214ENST00000556063 SVEP1Q4LDE5 3571 aa5.96□□□□□ -1.45
TDP1-214ENST00000556063 A0A1B0GW64 132 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 M0QZ24 198 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 CORTO00230 105 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 GOSR2O14653 212 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 SYNGR2O43760 224 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 RPLP1P05386 114 aaKnown RBP5.96□□□□□ -1.46
TDP1-214ENST00000556063 REG1AP05451 166 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 PVALBP20472 110 aaPredicted RBP5.96□□□□□ -1.46
TDP1-214ENST00000556063 HTR2BP41595 481 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 CDX1P47902 265 aaPredicted RBP5.96□□□□□ -1.46
TDP1-214ENST00000556063 RPL23AP62750 156 aaKnown RBP5.96□□□□□ -1.46
TDP1-214ENST00000556063 RHOGP84095 191 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 ATP5G2Q06055 141 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 C2orf68Q2NKX9 166 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 SPINK9Q5DT21 86 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 SLC25A24Q6NUK1 477 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 C10orf99Q6UWK7 81 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 ZBTB8BQ8NAP8 495 aaPredicted RBP5.96□□□□□ -1.46
TDP1-214ENST00000556063 ZNF114Q8NC26 417 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 OR4F17Q8NGA8 305 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 DTD1Q8TEA8 209 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 CXorf58Q96LI9 332 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 OR4F4Q96R69 305 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 KLK15Q9H2R5 256 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 RBKSQ9H477 322 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 FBXL7Q9UJT9 491 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 ALG5Q9Y673 324 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 U3KQ87 197 aa5.96□□□□□ -1.46
TDP1-214ENST00000556063 IGLV11-55A0A075B6I3 123 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 TRBV9A0A0B4J1U6 114 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 MPTX1A8MV57 137 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 L7N2F9 121 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 CCSO14618 274 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 OR2J3O76001 311 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 NXPH3O95157 252 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 SCGB1D2O95969 90 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 IFNA10P01566 189 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 RLN2P04090 185 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 NPY1RP25929 384 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 KRTAP10-3P60369 221 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 RAB11AP62491 216 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 VAMP2P63027 116 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 ID3Q02535 119 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 EXOSC2Q13868 293 aaKnown RBP5.95□□□□□ -1.46
TDP1-214ENST00000556063 KLK9Q2XQG4 91 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 NSUN5P1Q3KNT7 163 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 TCTEX1D4Q5JR98 221 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 ZNF491Q8N8L2 437 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 KLHL30-AS1Q8NEE0 82 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 SLC24A4Q8NFF2 622 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 OR4D5Q8NGN0 318 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 MYOZ3Q8TDC0 251 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 EEF1AKMT3Q96AZ1 226 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 OR10C1Q96KK4 312 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 RAB40CQ96S21 281 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 P2RX4Q99571 388 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 GAR1Q9NY12 217 aaKnown RBP5.95□□□□□ -1.46
TDP1-214ENST00000556063 MGAT4CQ9UBM8 478 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 KLK9Q9UKQ9 250 aa5.95□□□□□ -1.46
TDP1-214ENST00000556063 TRBV7-1A0A0A6YYK4 115 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 RPS10-NUDT3A0A1W2PQS6 291 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 A0A1W2PRX2 142 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 SCGB2A1O75556 95 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
TDP1-214ENST00000556063 PRH1P02810 166 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 IFNA4P05014 189 aa5.94□□□□□ -1.46
TDP1-214ENST00000556063 LGALS1P09382 135 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms