RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MEIS3P1A6NDR6 274 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 MRPS14O60783 128 aaKnown RBP10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 F2RP25116 425 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 PSMB9P28065 219 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 SCAND1P57086 179 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 MXD1Q05195 221 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 AADACL3Q5VUY0 350 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 DHRS11Q6UWP2 260 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 HSD17B13Q7Z5P4 300 aaPredicted RBP10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 LILRB2Q8N423 598 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 RHPN1-AS1Q9BWJ2 59 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 CSTL1Q9H114 145 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
CHMP4BP1-201ENST00000556017 A0A0A6YYH2 397 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 A6NJ64 397 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 I3L2K1 104 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 KRASP01116 189 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 RLN1P04808 185 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 LPAR6P43657 344 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 RFX2P48378 723 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 MOB3AQ96BX8 217 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 FXYD6Q9H0Q3 95 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C11orf68Q9H3H3 251 aaKnown RBP10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TMEM14BQ9NUH8 114 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 SSR3Q9UNL2 185 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 PKD1P98161 4303 aa10.49□□□□□ -0.73
CHMP4BP1-201ENST00000556017 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 NAT1P18440 290 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 G6PCP35575 357 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 UBAC2Q8NBM4 344 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 RARRES2Q99969 163 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 HINT2Q9BX68 163 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 RAB26Q9ULW5 256 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR51B2Q9Y5P1 312 aa10.48□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGHV3OR16-13A0A075B7E8 117 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGHV3-74A0A0B4J1X5 117 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGKV1-39P01597 117 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 APOHP02749 345 aaPredicted RBP10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGKV1D-39P04432 117 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TFPI2P48307 235 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 HSPA13P48723 471 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 Q56UQ5 140 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IDNKQ5T6J7 187 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 FAM24BQ8N5W8 94 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TMEM116Q8NCL8 245 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR1P1Q8NH06 330 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 OR11H2Q8NH07 326 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 DGCR14Q96DF8 476 aaKnown RBP10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 NXF2Q9GZY0 626 aaKnown RBP10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 EHFQ9NZC4 300 aa10.47□□□□□ -0.73
CHMP4BP1-201ENST00000556017 IGKV3-7A0A075B6H7 116 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C15orf61A6NNL5 157 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 MPTX1A8MV57 137 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 DEFB4AO15263 64 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 XRCC3O43542 346 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 TGFBR1P36897 503 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 LYSMD2Q8IV50 215 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 C11orf45Q8TAV5 145 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 FCGR1BQ92637 280 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 SEC22AQ96IW7 307 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 ZNF2Q9BSG1 426 aaPredicted RBP10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 APLNQ9ULZ1 77 aa10.46□□□□□ -0.73
CHMP4BP1-201ENST00000556017 NUPL2O15504 423 aaKnown RBP10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 CYB5BO43169 146 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 CBX5P45973 191 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 HERV-K104P61576 105 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 ERVK-16P61578 105 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 Q8NAQ8 132 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 ZNF114Q8NC26 417 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 ST8SIA2Q92186 375 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 VSIRQ9H7M9 311 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 ZFAND3Q9H8U3 227 aa10.45□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MT-CO2P00403 227 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 PMP2P02689 132 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RBMS2Q15434 407 aaKnown RBP10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TOMM20LQ6UXN7 152 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 SLC25A46Q96AG3 418 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TXN2Q99757 166 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 VCX3BQ9H321 246 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 DIABLOQ9NR28 239 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 FBXL17Q9UF56 701 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 PRNDQ9UKY0 176 aa10.44□□□□□ -0.74
CHMP4BP1-201ENST00000556017 DYNC1H1Q14204 4646 aaKnown RBP10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TRAV14DV4A0A0A6YYC5 116 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 LOC100506127A0A0U1RQW1 187 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 GPR31O00270 319 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MFAP4P55083 255 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TCF24Q7RTU0 167 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 TMEM56Q96MV1 263 aa10.43□□□□□ -0.74
CHMP4BP1-201ENST00000556017 MS4A6AQ9H2W1 248 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms