RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 AKR1C2P52895 323 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 GPHB5Q86YW7 130 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 ASCL2Q99929 193 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 THYN1Q9P016 225 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 V9GYH0 126 aa15.55■□□□□ 0.08
VTI1B-205ENST00000555543 IGHV3-21A0A0B4J1V1 117 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 A0A0B4J293 547 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 A0A0G2JRQ6 117 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 C2orf70A6NJV1 201 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 LGALS9O00182 355 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 PRCDQ00LT1 54 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 SURF2Q15527 256 aaPredicted RBP15.54■□□□□ 0.08
VTI1B-205ENST00000555543 TRIM16LQ309B1 348 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 Q8N1Y9 231 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 VN1R17PQ8TDU5 208 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 PRRT1Q99946 306 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 THAP7Q9BT49 309 aaPredicted RBP15.54■□□□□ 0.08
VTI1B-205ENST00000555543 SLC2A8Q9NY64 477 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 GPR132Q9UNW8 380 aa15.54■□□□□ 0.08
VTI1B-205ENST00000555543 C14orf166Q9Y224 244 aaKnown RBP15.54■□□□□ 0.08
VTI1B-205ENST00000555543 HUWE1Q7Z6Z7 4374 aaKnown RBP15.54■□□□□ 0.08
VTI1B-205ENST00000555543 K7EIM0 57 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 CYB5BO43169 146 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 OR5AC1P0C628 307 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 HSPE1P61604 102 aaKnown RBP15.53■□□□□ 0.08
VTI1B-205ENST00000555543 ZNF79Q15937 498 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 SPINK9Q5DT21 86 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 OR2C3Q8N628 320 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 LHFPL5Q8TAF8 219 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 CACNG8Q8WXS5 425 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 TRIM63Q969Q1 353 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 TMEM222Q9H0R3 208 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 NAA60Q9H7X0 242 aa15.53■□□□□ 0.08
VTI1B-205ENST00000555543 IGHV3-35A0A0C4DH35 117 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 F8W735 103 aaPredicted RBP15.52■□□□□ 0.08
VTI1B-205ENST00000555543 FOLR2P14207 255 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 LCN12Q6JVE5 192 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 UNQ9165/PRO28630Q6UXU0 137 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 Q8N402 240 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 OR1P1Q8NH06 330 aa15.52■□□□□ 0.08
VTI1B-205ENST00000555543 STAB2Q8WWQ8 2551 aa15.52■□□□□ 0.07
VTI1B-205ENST00000555543 TEX13DA0A0J9YY54 714 aaPredicted RBP15.51■□□□□ 0.07
VTI1B-205ENST00000555543 ZNF320A2RRD8 509 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 TMEM213A2RRL7 107 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 OR2T8A6NH00 312 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 CRYM-AS1A6NIL9 109 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 A8MWP6 167 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 FRMD6-AS1P0C7T7 363 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 KLF9Q13886 244 aaPredicted RBP15.51■□□□□ 0.07
VTI1B-205ENST00000555543 CD300EQ496F6 205 aaPredicted RBP15.51■□□□□ 0.07
VTI1B-205ENST00000555543 PYDC2Q56P42 97 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 LINC00299Q6ZSB3 139 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 CCDC190Q86UF4 302 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 SCARB1Q8WTV0 552 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 GLYATL2Q8WU03 294 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 MCUBQ9NWR8 336 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 SELENOKQ9Y6D0 94 aa15.51■□□□□ 0.07
VTI1B-205ENST00000555543 ST8SIA3O43173 380 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 TGOLN2O43493 480 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 B3GALNT1O75752 331 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 CDS2O95674 445 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 DEFB114Q30KQ6 69 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 FAM106AQ4KMX7 169 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 PLET1Q6UQ28 207 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 ZNF114Q8NC26 417 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 OR1L6Q8NGR2 347 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 OR2K2Q8NGT1 345 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 DYNLRB2Q8TF09 96 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 TMEM230Q96A57 120 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 PLEKHA3Q9HB20 300 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 C21orf62Q9NYP8 219 aa15.5■□□□□ 0.07
VTI1B-205ENST00000555543 ATG12O94817 140 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 NHLRC4P0CG21 123 aaPredicted RBP15.49■□□□□ 0.07
VTI1B-205ENST00000555543 IGHV4-30-4P0DP06 118 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 CBLN1P23435 193 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 S100A5P33763 92 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 Q6ZRM9 215 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 SBSPONQ8IVN8 264 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 CHRDL1Q9BU40 450 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 ZNF436Q9C0F3 470 aaPredicted RBP15.49■□□□□ 0.07
VTI1B-205ENST00000555543 SCP2D1Q9UJQ7 156 aa15.49■□□□□ 0.07
VTI1B-205ENST00000555543 TENM3Q9P273 2699 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 ADMP35318 185 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 TM4SF20Q53R12 229 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 SELENOHQ8IZQ5 122 aaKnown RBP15.48■□□□□ 0.07
VTI1B-205ENST00000555543 RNASE11Q8TAA1 199 aaKnown RBP15.48■□□□□ 0.07
VTI1B-205ENST00000555543 RBPMSQ93062 196 aaKnown RBP15.48■□□□□ 0.07
VTI1B-205ENST00000555543 RRNAD1Q96FB5 475 aaKnown RBP15.48■□□□□ 0.07
VTI1B-205ENST00000555543 MISP3Q96FF7 219 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 BSCL2Q96G97 398 aaPredicted RBP15.48■□□□□ 0.07
VTI1B-205ENST00000555543 PRR13Q9NZ81 148 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 MLXQ9UH92 298 aa15.48■□□□□ 0.07
VTI1B-205ENST00000555543 ZNF785A8K8V0 405 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 I3L2K1 104 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 IFNA17P01571 189 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 TMEM268Q5VZI3 342 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 SLC35G3Q8N808 338 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 UBAC2Q8NBM4 344 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 ZNF414Q96IQ9 312 aa15.47■□□□□ 0.07
VTI1B-205ENST00000555543 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 363.5 ms