RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 LINC00869P0C866 280 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 NPPCP23582 126 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 GCHFRP30047 84 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 LGALS7P47929 136 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 PPOXP50336 477 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 GNB1P62873 340 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 VMA21Q3ZAQ7 101 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 CHODLQ9H9P2 273 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 RAXQ9Y2V3 346 aa17.25■□□□□ 0.35
ARHGEF40-204ENST00000555038 ATP5G3P48201 142 aa17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 HLA-DRB5Q30154 266 aa17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 ZNF672Q499Z4 452 aaPredicted RBP17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 LINC01560Q8TB33 94 aa17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 ATMQ13315 3056 aa17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 SPTBN4Q9H254 2564 aa17.24■□□□□ 0.35
ARHGEF40-204ENST00000555038 PCNX1Q96RV3 2341 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 HOXA5P20719 270 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 REG1BP48304 166 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 SUB1P53999 127 aaKnown RBP eCLIP17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 UBE2G2P60604 165 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 C11orf42Q8N5U0 333 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 RNASEH2CQ8TDP1 164 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 ARFGEF3Q5TH69 2177 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 PPP1R2P9O14990 202 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 PLAUP00749 431 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 IGLV2-23P01705 113 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 SRP14P37108 136 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 PRRX1P54821 245 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 GAMTQ14353 236 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 MRPL41Q8IXM3 137 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 OR51G1Q8NGK1 321 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 SSX3Q99909 188 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 SRD5A3Q9H8P0 318 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 SEPSECSQ9HD40 501 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 TMEM167BQ9NRX6 74 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 FUT9Q9Y231 359 aa17.23■□□□□ 0.35
ARHGEF40-204ENST00000555038 PIEZO2Q9H5I5 2752 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 SPTBN2O15020 2390 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 IGHV2-70P01814 119 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 GALR1P47211 349 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 NBEAQ8NFP9 2946 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 BTF3L4Q96K17 158 aa17.22■□□□□ 0.35
ARHGEF40-204ENST00000555038 TRGC2P03986 189 aa17.21■□□□□ 0.35
ARHGEF40-204ENST00000555038 AREGP15514 252 aa17.21■□□□□ 0.35
ARHGEF40-204ENST00000555038 LINC01551Q86U37 167 aa17.21■□□□□ 0.35
ARHGEF40-204ENST00000555038 RNF2Q99496 336 aa17.21■□□□□ 0.35
ARHGEF40-204ENST00000555038 DMXL2Q8TDJ6 3036 aa17.21■□□□□ 0.35
ARHGEF40-204ENST00000555038 CEP295Q9C0D2 2601 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BKO60814 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 NDUFB4O95168 129 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BJP06899 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BOP23527 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BBP33778 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 CDX1P47902 265 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BDP58876 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BCP62807 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST2H2BEQ16778 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 SLC16A13Q7RTY0 426 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 OR10W1Q8NGF6 305 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 C8orf46Q8TAG6 207 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BHQ93079 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 C11orf52Q96A22 123 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 IMMP2LQ96T52 175 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BNQ99877 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 HIST1H2BMQ99879 126 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 TECRQ9NZ01 308 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 TAS2R45P59539 299 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 S100A12P80511 92 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 DIAPH2-AS1Q14236 149 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 FAM78BQ5VT40 261 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 ZNF841Q6ZN19 808 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 PQLC2Q6ZP29 291 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 TEX45Q8NA69 505 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 BEND2Q8NDZ0 799 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 UHRF2Q96PU4 802 aa17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 ZNF430Q9H8G1 570 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-204ENST00000555038 POLEQ07864 2286 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 TLN1Q9Y490 2541 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 ELOA3CA0A087WX78 387 aaPredicted RBP17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 SIAH2O43255 324 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 IGLV1-47P01700 117 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 OR5G3P0C626 314 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 OR10J1P30954 320 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 SSX2Q16385 188 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 KCNIP4Q6PIL6 250 aa17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 MRPL32Q9BYC8 188 aaKnown RBP17.19■□□□□ 0.34
ARHGEF40-204ENST00000555038 ROS1P08922 2347 aa17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 IGKV1OR2-108A0A075B7D4 117 aa17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 IGHV2-26A0A0B4J1V2 119 aa17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 GGCTO75223 188 aaKnown RBP17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 SPATA31B1PQ5VZV4 182 aa17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 OR4P4Q8NGL7 312 aa17.18■□□□□ 0.34
ARHGEF40-204ENST00000555038 PHOX2AO14813 284 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 COL8A2P25067 703 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 NDUFA6P56556 154 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 ADORA2A-AS1P86434 159 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 CLEC7AQ9BXN2 247 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 MIOXQ9UGB7 285 aa17.17■□□□□ 0.34
ARHGEF40-204ENST00000555038 AMMECR1Q9Y4X0 333 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms