RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 UMODL1-AS1Q8N2C9 162 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 RAB2BQ8WUD1 216 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 C12orf43Q96C57 262 aaKnown RBP2.74□□□□□ -1.97
PSEN1-211ENST00000554995 CHMP6Q96FZ7 201 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 CAPZA3Q96KX2 299 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 BOLA2Q9H3K6 86 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 CXorf21Q9HAI6 301 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 COQ4Q9Y3A0 265 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 HSPE1-MOB4S4R3N1 261 aa2.74□□□□□ -1.97
PSEN1-211ENST00000554995 DICER1Q9UPY3 1922 aaKnown RBP2.74□□□□□ -1.97
PSEN1-211ENST00000554995 ANKRD31Q8N7Z5 1873 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 TRPM7Q96QT4 1865 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 ATAD5Q96QE3 1844 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 TMEM114B3SHH9 223 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 COX7A2LO14548 114 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 CTSGP08311 255 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 CTXN2P0C2S0 81 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 HOXA6P31267 233 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 SPCS3P61009 180 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 FAM201AQ5SY85 155 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 ALKAL1Q6UXT8 129 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 GPHB5Q86YW7 130 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 OR5C1Q8NGR4 320 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 RPS4Y2Q8TD47 263 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 SLC35B4Q969S0 331 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 PECRQ9BY49 303 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 SLC22A13Q9Y226 551 aa2.73□□□□□ -1.97
PSEN1-211ENST00000554995 CHD8Q9HCK8 2581 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 RBBP6Q7Z6E9 1792 aaKnown RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 MYH7BA7E2Y1 1941 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 MYH4Q9Y623 1939 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 KIAA0100Q14667 2235 aaKnown RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 GRIFINA4D1Z8 144 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 VPS37CA5D8V6 355 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 OR4C45A6NMZ5 311 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 C17orf51A8MQB3 221 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 OR11H12B2RN74 326 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 G3V3Q6 166 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 KPNA3O00505 521 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 ATP5HO75947 161 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 OR5G3P0C626 314 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 CPMP14384 443 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 ALOX5APP20292 161 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 CD200P41217 278 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 RWDD2BP57060 319 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 TBPL1P62380 186 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 RANP62826 216 aaKnown RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 PSG4Q00888 419 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 IFITM2Q01629 132 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 LGALS9BQ3B8N2 356 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 LGALS9CQ6DKI2 356 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 SPATA12Q7Z6I5 190 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 OR11H2Q8NH07 326 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 PRUNE2Q8WUY3 3088 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 ANKRD7Q92527 254 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 SFRP2Q96HF1 295 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 VPS29Q9UBQ0 182 aa2.72□□□□□ -1.97
PSEN1-211ENST00000554995 BAZ2BQ9UIF8 2168 aaKnown RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 KLK5Q9Y337 293 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 COL4A4P53420 1690 aaPredicted RBP2.72□□□□□ -1.97
PSEN1-211ENST00000554995 LAMA3Q16787 3333 aa2.71□□□□□ -1.97
PSEN1-211ENST00000554995 EYSQ5T1H1 3165 aa2.71□□□□□ -1.97
PSEN1-211ENST00000554995 CLDN24A6NM45 220 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 OR5K4A6NMS3 321 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 EEF1E1-BLOC1S5C9J1V9 151 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 C9JCJ5 164 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 H3BQV1 296 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 FAM228BP0C875 321 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 IDH3GP51553 393 aaPredicted RBP2.71□□□□□ -1.98
PSEN1-211ENST00000554995 ZNF140P52738 457 aaPredicted RBP2.71□□□□□ -1.98
PSEN1-211ENST00000554995 TNFAIP6P98066 277 aaPredicted RBP2.71□□□□□ -1.98
PSEN1-211ENST00000554995 FABP9Q0Z7S8 132 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 TAF9Q16594 264 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 SPOPLQ6IQ16 392 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 C1orf158Q8N1D5 194 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 CLDN22Q8N7P3 220 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 OR2T4Q8NH00 348 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 LHFPL5Q8TAF8 219 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 NMNAT3Q96T66 252 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 AICDAQ9GZX7 198 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 ROBO3Q96MS0 1386 aa2.71□□□□□ -1.98
PSEN1-211ENST00000554995 COL4A1P02462 1669 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 IGHV1-69-2A0A0G2JMI3 117 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 INMT-MINDY4F8WBC2 141 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 UBFD1O14562 309 aaKnown RBP2.7□□□□□ -1.98
PSEN1-211ENST00000554995 TRAPPC3O43617 180 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 NDUFB2O95178 105 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 KRT75O95678 551 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 IGHV1-69P01742 117 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 FKBP1AP62942 108 aaKnown RBP2.7□□□□□ -1.98
PSEN1-211ENST00000554995 CCL7P80098 99 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 TMPPEQ6ZT21 453 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 CNEP1R1Q8N9A8 125 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 OR1L8Q8NGR8 309 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 SGMS2Q8NHU3 365 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 PRAP1Q96NZ9 151 aa2.7□□□□□ -1.98
PSEN1-211ENST00000554995 PSTPIP2Q9H939 334 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms