RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 AMMECR1LQ6DCA0 310 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 IGHV1-69-2A0A0G2JMI3 117 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 PLAUP00749 431 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 GRNP28799 593 aaKnown RBP13.79□□□□□ -0.2
PCNX1-209ENST00000554879 PLP1P60201 277 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 BAXQ07812 192 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 ICAM4Q14773 271 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 CRIP3Q6Q6R5 217 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 H1FOOQ8IZA3 346 aaPredicted RBP13.79□□□□□ -0.2
PCNX1-209ENST00000554879 SELENOHQ8IZQ5 122 aaKnown RBP13.79□□□□□ -0.2
PCNX1-209ENST00000554879 MYO18BQ8IUG5 2567 aa13.79□□□□□ -0.2
PCNX1-209ENST00000554879 A0A1W2PPV4 95 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 CDS2O95674 445 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 HES1Q14469 280 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 Q6ZSR3 168 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 CHRDL1Q9BU40 450 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 H0Y980 276 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 CLN8Q9UBY8 286 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 THBS3P49746 956 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 FAM90A1Q86YD7 464 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 RTL8BQ17RB0 113 aa13.78□□□□□ -0.2
PCNX1-209ENST00000554879 CBLN1P23435 193 aa13.77□□□□□ -0.2
PCNX1-209ENST00000554879 TCL1AP56279 114 aa13.77□□□□□ -0.2
PCNX1-209ENST00000554879 C22orf34Q6ZV56 151 aa13.77□□□□□ -0.2
PCNX1-209ENST00000554879 RAB1CQ92928 201 aa13.77□□□□□ -0.2
PCNX1-209ENST00000554879 GPR146Q96CH1 333 aa13.77□□□□□ -0.2
PCNX1-209ENST00000554879 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.77□□□□□ -0.2
PCNX1-209ENST00000554879 IGKV1-6A0A0C4DH72 117 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 SYNGR2O43760 224 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 RPL39P5Q59GN2 51 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 GTSF1LQ9H1H1 148 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 B9A039 149 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 GNLYP22749 145 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 FGFRL1Q8N441 504 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF645Q8N7E2 425 aa13.77□□□□□ -0.21
PCNX1-209ENST00000554879 A0A1B0GU03 582 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 VKORC1L1Q8N0U8 176 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 RBKSQ9H477 322 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 FOXI3A8MTJ6 420 aaPredicted RBP13.76□□□□□ -0.21
PCNX1-209ENST00000554879 LY6HO94772 140 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 NUDT3O95989 172 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 HLA-GP17693 338 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 SPRNQ5BIV9 151 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 MOB3BQ86TA1 216 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 COQ2Q96H96 371 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 IGKV1D-17A0A075B6S4 117 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 SNURFLB1AK76 121 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 LGALS4P56470 323 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 GUSBP1Q15486 140 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 HLA-DRB5Q30154 266 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 RAB37Q96AX2 223 aa13.76□□□□□ -0.21
PCNX1-209ENST00000554879 SERF1AO75920 110 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 S1PR2O95136 353 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 MSMPQ1L6U9 139 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 CCL3L1P16619 93 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 IL3RAP26951 378 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 PAFAH1B2P68402 229 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF324BQ6AW86 544 aaPredicted RBP13.75□□□□□ -0.21
PCNX1-209ENST00000554879 FAM169BQ8N8A8 192 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF714Q96N38 554 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 NAA38Q9BRA0 125 aaKnown RBP13.75□□□□□ -0.21
PCNX1-209ENST00000554879 HIVEP3Q5T1R4 2406 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 UBE2L5PA0A1B0GUS4 154 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 IL6RP08887 468 aaPredicted RBP13.75□□□□□ -0.21
PCNX1-209ENST00000554879 LINC00205P59089 165 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 GNB1P62873 340 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 TMEM170AQ8WVE7 144 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 HSD17B10Q99714 261 aaKnown RBP13.75□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF835Q9Y2P0 537 aa13.75□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF207O43670 478 aaKnown RBP13.74□□□□□ -0.21
PCNX1-209ENST00000554879 CDKN1AP38936 164 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 OR10P1Q8NGE3 313 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 ORAOV1Q8WV07 137 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 CSTL1Q9H114 145 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 HSPB7Q9UBY9 170 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 NOTCH2Q04721 2471 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 IGHV3-72A0A0B4J1Y9 119 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
PCNX1-209ENST00000554879 RNASEKQ6P5S7 137 aaKnown RBP13.74□□□□□ -0.21
PCNX1-209ENST00000554879 TGIF2LYQ8IUE0 185 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 BMPR1BO00238 502 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 DUX4L9Q6RFH8 374 aaPredicted RBP13.74□□□□□ -0.21
PCNX1-209ENST00000554879 RNASEH2CQ8TDP1 164 aaKnown RBP13.74□□□□□ -0.21
PCNX1-209ENST00000554879 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 E7EQL1 145 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 SNAI2O43623 268 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 PAGE4O60829 102 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 RELBQ01201 579 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 ZNF506Q5JVG8 444 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 RAB40CQ96S21 281 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 SDF2L1Q9HCN8 221 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 TUBD1Q9UJT1 453 aa13.74□□□□□ -0.21
PCNX1-209ENST00000554879 C17orf98A8MV24 154 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms