RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 OR5C1Q8NGR4 320 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 R3HDM4Q96D70 268 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 ADTRPQ96IZ2 230 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 OR4F4Q96R69 305 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 CITED2Q99967 270 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-214ENST00000554604 PSENENQ9NZ42 101 aa9.86□□□□□ -0.83
SHMT2-214ENST00000554604 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-214ENST00000554604 M0R1X1 148 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 LY86O95711 162 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 KRASP01116 189 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 REG1BP48304 166 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 THBS3P49746 956 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 TNFRSF9Q07011 255 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 AARDQ4LEZ3 155 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 PDLIM3Q53GG5 364 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-214ENST00000554604 CT45A1Q5HYN5 189 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 BTNL8Q6UX41 500 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 C1QL4Q86Z23 238 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 CT45A3Q8NHU0 189 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 LYPD6BQ8NI32 183 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 WIPF2Q8TF74 440 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-214ENST00000554604 DDB2Q92466 427 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 GNPNAT1Q96EK6 184 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-214ENST00000554604 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
SHMT2-214ENST00000554604 ATP5SQ99766 215 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 RBKSQ9H477 322 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 CACFD1Q9UGQ2 172 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 PRELID3BQ9Y3B1 194 aa9.85□□□□□ -0.83
SHMT2-214ENST00000554604 IGHV1-3A0A0C4DH29 117 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 A0A1W2PRX2 142 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 SLC31A2O15432 143 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 CST7O76096 145 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 IGKV1D-33P01593 117 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 IGKV1-33P01594 117 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 AMY1AP04745 511 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 F2RL1P55085 397 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 UBE2KP61086 200 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 CLINT1Q14677 625 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 Q6ZRG5 221 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 LINC00311Q8N616 119 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 COMMD1Q8N668 190 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 C8orf31Q8N9H6 132 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 OR4X2Q8NGF9 303 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 S1PR3Q99500 378 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 ZNF251Q9BRH9 671 aa9.84□□□□□ -0.83
SHMT2-214ENST00000554604 IGHV3-72A0A0B4J1Y9 119 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 TCRBV4S1A1TA0A5B7 111 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 MARCH11A6NNE9 402 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 FCGR3BO75015 233 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 SCAF4O95104 1147 aaKnown RBP9.83□□□□□ -0.84
SHMT2-214ENST00000554604 IAPPP10997 89 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 HBG1P69891 147 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 HBG2P69892 147 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 RPL39P5Q59GN2 51 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 KHDC1LQ5JSQ8 128 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM14EPQ6UXP3 125 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 SLC25A48Q6ZT89 311 aaKnown RBP9.83□□□□□ -0.84
SHMT2-214ENST00000554604 BPIFCQ8NFQ6 507 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 OR4S2Q8NH73 311 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 CIB3Q96Q77 187 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-214ENST00000554604 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-214ENST00000554604 SH3BGRL3Q9H299 93 aa9.83□□□□□ -0.84
SHMT2-214ENST00000554604 SAA2-SAA4A0A096LPE2 208 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 NCBP2LA6PVI3 153 aaKnown RBP9.82□□□□□ -0.84
SHMT2-214ENST00000554604 H3BP45 60 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 IFNA5P01569 189 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 OR8U8P0C7N1 319 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 SAA2P0DJI9 122 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-214ENST00000554604 PF4V1P10720 104 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 NQO2P16083 231 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 CAMLGP49069 296 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 ERVK-16P61578 105 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM267Q0VDI3 215 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-214ENST00000554604 TGIF2LXQ8IUE1 241 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM217Q8N7C4 229 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 C5orf56Q8N8D9 126 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 OR2T10Q8NGZ9 312 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 OR52E5Q8NH55 327 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 HRH4Q9H3N8 390 aa9.82□□□□□ -0.84
SHMT2-214ENST00000554604 TSSC4Q9Y5U2 329 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-214ENST00000554604 TMEM218A2RU14 115 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 PSMB11A5LHX3 300 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 ADARB2-AS1A8MUL3 147 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 G3V4G9 280 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 METTL15P1P0C7V9 234 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 CD1BP29016 333 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 LINC00205P59089 165 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 POU2AF1Q16633 256 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 ATP6V1FQ16864 119 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 DPPA3Q6W0C5 159 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 HAPLN4Q86UW8 402 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 OR2G3Q8NGZ4 309 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 DTD1Q8TEA8 209 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 ST6GALNAC6Q969X2 333 aa9.81□□□□□ -0.84
SHMT2-214ENST00000554604 EAF1Q96JC9 268 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-214ENST00000554604 CRYZL1O95825 349 aa9.8□□□□□ -0.84
SHMT2-214ENST00000554604 MOSP00540 346 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms