RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 NAA50Q9GZZ1 169 aaKnown RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 PSORS1C1Q9UIG5 152 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 WASHC3Q9Y3C0 194 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 DYNC1H1Q14204 4646 aaKnown RBP3.56□□□□□ -1.84
ATXN3-228ENST00000554592 DNAH11Q96DT5 4516 aa3.56□□□□□ -1.84
ATXN3-228ENST00000554592 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 TRAV25A0A0B4J276 109 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 DAPL1A0PJW8 107 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 J3QLW9 94 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 M0R129 80 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 LGALS9O00182 355 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MYL12BO14950 172 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 WBP4O75554 376 aaKnown RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 CDK2AP2O75956 126 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 IGKV3-20P01619 116 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MAS1P04201 325 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 CDK1P06493 297 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 CD36P16671 472 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF19P17023 458 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MYL12AP19105 171 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SERPINA2P20848 420 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 CBLN1P23435 193 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 PTBP1P26599 531 aaKnown RBP eCLIP3.55□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-228ENST00000554592 PSMB9P28065 219 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF93P35789 620 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 GNMTQ14749 295 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 OPCMLQ14982 345 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 DEFB135Q30KP9 77 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SLC22A6Q4U2R8 563 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SPANXN2Q5MJ10 180 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SLC25A30Q5SVS4 291 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 DMKNQ6E0U4 476 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 RAB12Q6IQ22 244 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SLC38A6Q8IZM9 456 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 OR51A2Q8NGJ7 313 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MCFD2Q8NI22 146 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 TSEN15Q8WW01 171 aaKnown RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 APH1BQ8WW43 257 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MRPL48Q96GC5 212 aaKnown RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 SULT4A1Q9BR01 284 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MND1Q9BWT6 205 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 DCSTAMPQ9H295 470 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 COA4Q9NYJ1 87 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 MDFICQ9P1T7 246 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 APLNQ9ULZ1 77 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 GPR132Q9UNW8 380 aa3.55□□□□□ -1.84
ATXN3-228ENST00000554592 RPL36Q9Y3U8 105 aaKnown RBP3.55□□□□□ -1.84
ATXN3-228ENST00000554592 FAM223BA6NKX1 122 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 TMEM212A6NML5 194 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 SNURFLB1AK76 121 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 IGLL5B9A064 214 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 C11orf94C9JXX5 98 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 J3QRE1 110 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 J3QRK9 145 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ITGB1BP1O14713 200 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 GGCTO75223 188 aaKnown RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 SC5DO75845 299 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 CRYGBP07316 175 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 OR9G9P0C7N8 305 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 CTRB1P17538 263 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 FUT3P21217 361 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 NPBWR1P48145 328 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 EIF2B2P49770 351 aaKnown RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 RHOGP84095 191 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ST3GAL4Q11206 333 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 CTRB2Q6GPI1 263 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 C5orf24Q7Z6I8 188 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 FAM223AQ8IWN6 122 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 TMEM61Q8N0U2 210 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ACBD7Q8N6N7 88 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ADAD2Q8NCV1 583 aaKnown RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 OR5AK2Q8NH90 309 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 FAM46BQ96A09 425 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 PRAC1Q96KF2 57 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 C4orf36Q96KX1 117 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ATG101Q9BSB4 218 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 TMEM138Q9NPI0 162 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 TAS2R4Q9NYW5 299 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ABRACLQ9P1F3 81 aa3.54□□□□□ -1.84
ATXN3-228ENST00000554592 ZNF230Q9UIE0 474 aaPredicted RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 EXOSC1Q9Y3B2 195 aaKnown RBP3.54□□□□□ -1.84
ATXN3-228ENST00000554592 TRBV9A0A0B4J1U6 114 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 BOLA2-SMG1P6H3BVE0 249 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 RTL8CO15255 209 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 SNAPC5O75971 98 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 AMBPP02760 352 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 IGKV1-16P04430 117 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 CD2P06729 351 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 SCTP09683 121 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 GALP22466 123 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 PSMA1P25786 263 aaKnown RBP3.53□□□□□ -1.84
ATXN3-228ENST00000554592 GBX2P52951 348 aaPredicted RBP3.53□□□□□ -1.84
ATXN3-228ENST00000554592 MFAP2P55001 183 aa3.53□□□□□ -1.84
ATXN3-228ENST00000554592 VBP1P61758 197 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms