RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 SLC35E4Q6ICL7 350 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 WDR73Q6P4I2 378 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TOMM20LQ6UXN7 152 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 Q6ZWC4 215 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM144Q7Z5S9 345 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF575Q86XF7 245 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 OR4F5Q8NH21 305 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 OR52E5Q8NH55 327 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 APH1AQ96BI3 265 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 GALMQ96C23 342 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 RPUSD4Q96CM3 377 aaKnown RBP4.88□□□□□ -1.63
VPS33B-203ENST00000554264 WDYHV1Q96HA8 205 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 OR4F4Q96R69 305 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 PRR25Q96S07 402 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 FAM173AQ9BQD7 235 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 C20orf144Q9BQM9 153 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 RSG1Q9BU20 258 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 SFXN3Q9BWM7 321 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 NPCDR1Q9BY65 106 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TTTY12Q9BZ98 90 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 FKBP11Q9NYL4 201 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TRAPPC2LQ9UL33 140 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 KCNS2Q9ULS6 477 aa4.88□□□□□ -1.63
VPS33B-203ENST00000554264 TRAV24A0A0B4J272 114 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1B0GV90 55 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1B0GWJ7 208 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 A0A1W2PPV4 95 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 C5orf49A4QMS7 147 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FAM166BA8MTA8 275 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF705GA8MUZ8 300 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 C9JCJ5 164 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 C11orf94C9JXX5 98 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 G3V3Y1 287 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 IFNL4K9M1U5 179 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 HS3ST1O14792 307 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 PROP1O75360 226 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 RBMXL2O75526 392 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 CXorf1O96002 111 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 IGKV1-5P01602 117 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 REG1AP05451 166 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 P0C879 139 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 MDKP21741 143 aaPredicted RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 GDF1P27539 372 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 OPRK1P41145 380 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 ARF1P84077 181 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 RAB31Q13636 194 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 TBC1D28Q2M2D7 210 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 TMEM30BQ3MIR4 351 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FBXL19-AS1Q494R0 122 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FFAR4Q5NUL3 377 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 GFI1BQ5VTD9 330 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF788Q6ZQV5 615 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 LRRC75A-AS1Q8N1F1 130 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF664Q8N3J9 261 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FGFRL1Q8N441 504 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 RPP25LQ8N5L8 163 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 OR2M7Q8NG81 312 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 DTD1Q8TEA8 209 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 DPF1Q92782 380 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 RNASE6Q93091 150 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 POM121L2Q96KW2 1035 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 UHRF2Q96PU4 802 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 C19orf24Q9BVV8 132 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 DEPPQ9NTK1 212 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 NAGKQ9UJ70 344 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 WDR83OSQ9Y284 106 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 CBY1Q9Y3M2 126 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 TRAPPC1Q9Y5R8 145 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 PXMP4Q9Y6I8 212 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 CSPG4Q6UVK1 2322 aa4.87□□□□□ -1.63
VPS33B-203ENST00000554264 YLPM1P49750 1951 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FLNAP21333 2647 aaKnown RBP4.87□□□□□ -1.63
VPS33B-203ENST00000554264 FN1P02751 2386 aaKnown RBP4.86□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF469Q96JG9 3925 aaPredicted RBP4.86□□□□□ -1.63
VPS33B-203ENST00000554264 A0A0G2JRQ6 117 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 PINLYPA6NC86 204 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 H3BP45 60 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 ITGB1BP1O14713 200 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 TNFSF12O43508 249 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 IGKV1-39P01597 117 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 IGKV1D-39P04432 117 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 RD3LP0DJH9 198 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 IAPPP10997 89 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 AREGP15514 252 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 KITLGP21583 273 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 MAGEA5P43359 124 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 FGF8P55075 233 aaPredicted RBP4.86□□□□□ -1.63
VPS33B-203ENST00000554264 TIRAPP58753 221 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 RPL15P61313 204 aaKnown RBP4.86□□□□□ -1.63
VPS33B-203ENST00000554264 ERVK11-1P61568 191 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 HTD2P86397 168 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 TGFBR3Q03167 851 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 RELQ04864 619 aaPredicted RBP4.86□□□□□ -1.63
VPS33B-203ENST00000554264 Q0VG73 95 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 ZNF585BQ52M93 769 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 PDZD11Q5EBL8 140 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 Q5PR19 223 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 FAM162BQ5T6X4 162 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 Q6P435 159 aa4.86□□□□□ -1.63
VPS33B-203ENST00000554264 RASL11AQ6T310 242 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms