RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 MISP3Q96FF7 219 aa4.93□□□□□ -1.62
LINC00520-203ENST00000554221 TMEM56Q96MV1 263 aa4.93□□□□□ -1.62
LINC00520-203ENST00000554221 SRSF8Q9BRL6 282 aaKnown RBP4.93□□□□□ -1.62
LINC00520-203ENST00000554221 CHRDL1Q9BU40 450 aa4.93□□□□□ -1.62
LINC00520-203ENST00000554221 PLEKHA2Q9HB19 425 aa4.93□□□□□ -1.62
LINC00520-203ENST00000554221 COMMD3Q9UBI1 195 aa4.93□□□□□ -1.62
LINC00520-203ENST00000554221 IGHV3-49A0A0A0MS15 119 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 GPR31O00270 319 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 NDUFA4O00483 81 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 SPRY2O43597 315 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 LY6G6CO95867 125 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 IGHV3-48P01763 117 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 C8orf88P0DMB2 117 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 S100GP29377 79 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 HRH1P35367 487 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 APOC4P55056 127 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 ELLP55199 621 aaPredicted RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 WT1-ASQ06250 92 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 POU2AF1Q16633 256 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 KLK9Q2XQG4 91 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 UBE2NLQ5JXB2 153 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 LPCAT3Q6P1A2 487 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 H2BFWTQ7Z2G1 175 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 HSD17B13Q7Z5P4 300 aaPredicted RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 WFDC3Q8IUB2 231 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 LYSMD2Q8IV50 215 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 GBGT1Q8N5D6 347 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 STPG3Q8N7X2 389 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 GDPD1Q8N9F7 314 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 OR4A16Q8NH70 328 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 SCARB1Q8WTV0 552 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 LSM10Q969L4 123 aaKnown RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 MOB3AQ96BX8 217 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 BSCL2Q96G97 398 aaPredicted RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 ZNF436Q9C0F3 470 aaPredicted RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 C5orf66Q9H5L9 145 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 NDUFA4L2Q9NRX3 87 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 FKBP11Q9NYL4 201 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 C21orf62Q9NYP8 219 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 COMMD9Q9P000 198 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 KLK9Q9UKQ9 250 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 F11RQ9Y624 299 aaKnown RBP4.92□□□□□ -1.62
LINC00520-203ENST00000554221 STAB2Q8WWQ8 2551 aa4.92□□□□□ -1.62
LINC00520-203ENST00000554221 A0A087WXM4 84 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TRAV14DV4A0A0A6YYC5 116 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 DBX1A6NMT0 343 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 A8MWP6 167 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TSPAN4O14817 238 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 NUPL2O15504 423 aaKnown RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 CTSDP07339 412 aaPredicted RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 BMI1P35226 326 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 MFAP2P55001 183 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 MFAP4P55083 255 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TAS2R46P59540 309 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 DEFB135Q30KP9 77 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 SPINK9Q5DT21 86 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 THOC7Q6I9Y2 204 aaKnown RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 SPSB3Q6PJ21 355 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TBC1D26Q86UD7 250 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 SNX29P2Q8IUI4 249 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 APRG1Q8IVJ8 170 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TMEM190Q8WZ59 177 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 SLC25A46Q96AG3 418 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 PINX1Q96BK5 328 aaKnown RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 TSC22D3Q99576 134 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 SPAG8Q99932 426 aaPredicted RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 RHPN1-AS1Q9BWJ2 59 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 DAZ1Q9NQZ3 744 aaKnown RBP4.91□□□□□ -1.62
LINC00520-203ENST00000554221 PRNDQ9UKY0 176 aa4.91□□□□□ -1.62
LINC00520-203ENST00000554221 IGHV3OR16-13A0A075B7E8 117 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 IGHV3-74A0A0B4J1X5 117 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 IGHV3-66A0A0C4DH42 116 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 OR4C46A6NHA9 309 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 FAM25AB3EWG3 89 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 FAM25CB3EWG5 89 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 FAM25GB3EWG6 89 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 K7EIM0 57 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 K7EMT4 169 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 TMEM127O75204 238 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 EIF4EP06730 217 aaKnown RBP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 CTSGP08311 255 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 PGAM2P15259 253 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 NAT1P18440 290 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 VBP1P61758 197 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 RPL11P62913 178 aaKnown RBP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 PAFAH1B2P68402 229 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 ERHP84090 104 aaKnown RBP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 EWSR1Q01844 656 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 RELQ04864 619 aaPredicted RBP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 ZNF124Q15973 351 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 IZUMO4Q1ZYL8 232 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 KCTD21Q4G0X4 260 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 RNASE12Q5GAN4 147 aaKnown RBP4.9□□□□□ -1.63
LINC00520-203ENST00000554221 LYG2Q86SG7 212 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 TMEM116Q8NCL8 245 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 YIPF6Q96EC8 236 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 GALNT14Q96FL9 552 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 CMTM3Q96MX0 182 aa4.9□□□□□ -1.63
LINC00520-203ENST00000554221 RNF2Q99496 336 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms