RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 UFC1Q9Y3C8 167 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 MPC1Q9Y5U8 109 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 SHISA8B8ZZ34 492 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 ZG16O60844 167 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 TIGITQ495A1 244 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 TMEM42Q69YG0 159 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 Q6ZR03 302 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 Q6ZUT4 128 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 MOB1BQ7L9L4 216 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 MRPL43Q8N983 215 aaKnown RBP7.88□□□□□ -1.15
SIX4-202ENST00000554079 NUP35Q8NFH5 326 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 OSR1Q8TAX0 266 aaPredicted RBP7.88□□□□□ -1.15
SIX4-202ENST00000554079 ZNF502Q8TBZ5 544 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 TMEM140Q9NV12 185 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 LOXL2Q9Y4K0 774 aa7.88□□□□□ -1.15
SIX4-202ENST00000554079 CEP192Q8TEP8 1941 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A10PA6NDY2 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A18PA6NE21 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A16PA6NEW6 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A20PA6NIJ5 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A8PA6NJQ4 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A7PA6NKC0 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A22PA8MWA6 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A12PA8MX19 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A5PA8MXJ8 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A23PA8MXZ1 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 NKX2-8O15522 239 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 WISP2O76076 250 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A15PP0C7V4 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A13PP0C7W8 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A14PP0C7W9 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FAM90A24PP0C7X0 464 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 NHLRC4P0CG21 123 aaPredicted RBP7.87□□□□□ -1.15
SIX4-202ENST00000554079 XGP55808 180 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 FHL3Q13643 280 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 SPATA46Q5T0L3 261 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.87□□□□□ -1.15
SIX4-202ENST00000554079 NHLRC2Q8NBF2 726 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 SSBP3Q9BWW4 388 aaPredicted RBP7.87□□□□□ -1.15
SIX4-202ENST00000554079 C1QTNF4Q9BXJ3 329 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 LIN7CQ9NUP9 197 aaKnown RBP7.87□□□□□ -1.15
SIX4-202ENST00000554079 ALKBH4Q9NXW9 302 aa7.87□□□□□ -1.15
SIX4-202ENST00000554079 TNRC6BQ9UPQ9 1833 aaKnown RBP7.87□□□□□ -1.15
SIX4-202ENST00000554079 hCG_38984A0A1B0GV85 526 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 C19orf67A6NJJ6 358 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 C15orf62A8K5M9 175 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 NCR2O95944 276 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 GABRG2P18507 467 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 CARD17Q5XLA6 110 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 FGFRL1Q8N441 504 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 PIP4P2Q8N4L2 257 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
SIX4-202ENST00000554079 ADTRPQ96IZ2 230 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 BMFQ96LC9 184 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 MGST2Q99735 147 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 OR1A1Q9P1Q5 309 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 USP34Q70CQ2 3546 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 E9PLD3 99 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 M0R135 149 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 MPDU1O75352 247 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 FOXH1O75593 365 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 COL8A2P25067 703 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 NTF4P34130 210 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 CFHR2P36980 270 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 KIR2DL2P43627 348 aaPredicted RBP7.86□□□□□ -1.15
SIX4-202ENST00000554079 FASLGP48023 281 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 FBXW4P57775 412 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 ZNF146Q15072 292 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 MIC13Q5XKP0 118 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 SYT8Q8NBV8 401 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 OR1L3Q8NH93 324 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 IL1F10Q8WWZ1 152 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 ZNF799Q96GE5 643 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 LRP4O75096 1905 aa7.86□□□□□ -1.15
SIX4-202ENST00000554079 FXYD2P54710 66 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 PRSS12P56730 875 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ZNF77Q15935 545 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 RTL8BQ17RB0 113 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 DEFB110Q30KQ9 67 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ZNF562Q6V9R5 426 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ATP5L2Q7Z4Y8 100 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 SFTPA2Q8IWL1 248 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 SFTPA1Q8IWL2 248 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 SPXQ9BT56 116 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 HRASLS2Q9NWW9 162 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 IDI2-AS1Q9NZ38 188 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 HCFC1P51610 2035 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 TET2Q6N021 2002 aaPredicted RBP7.85□□□□□ -1.15
SIX4-202ENST00000554079 C2CD4DB7Z1M9 353 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.85□□□□□ -1.15
SIX4-202ENST00000554079 GPR12P47775 334 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 TAS2R45P59539 299 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ASPHD1Q5U4P2 390 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 FAM231DQ6ZW35 169 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 PPP1R32Q7Z5V6 425 aa7.85□□□□□ -1.15
SIX4-202ENST00000554079 ANKRD37Q7Z713 158 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms