RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 PRR20CP86479 221 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRR20DP86480 221 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRR20BP86481 221 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRR20AP86496 221 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 POLEQ07864 2286 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PSG5Q15238 335 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 RTL8BQ17RB0 113 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 SLC25A48Q6ZT89 311 aaKnown RBP11.89□□□□□ -0.51
ACTN1-211ENST00000553882 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 OR10G8Q8NGN5 311 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 OR5R1Q8NH85 324 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 RNASEH2CQ8TDP1 164 aaKnown RBP11.89□□□□□ -0.51
ACTN1-211ENST00000553882 NEUROG1Q92886 237 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 SFXN3Q9BWM7 321 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 CEP295Q9C0D2 2601 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 TM4SF5O14894 197 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 OR4A8P0C604 315 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 LINC00869P0C866 280 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 SAA1P0DJI8 122 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-211ENST00000553882 PRCDQ00LT1 54 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 FOXL1Q12952 345 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 OR5I1Q13606 314 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 TMEM256Q8N2U0 113 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 TXNDC17Q9BRA2 123 aa11.89□□□□□ -0.51
ACTN1-211ENST00000553882 UPK2O00526 184 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 KLK10O43240 276 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 OR10J4P0C629 311 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 IMMP2LQ96T52 175 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 NABP2Q9BQ15 211 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 MRPL20Q9BYC9 149 aaKnown RBP11.88□□□□□ -0.51
ACTN1-211ENST00000553882 NCOR1P1Q9H4R4 102 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 TEX50A0A1B0GTY4 177 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 GRIFINA4D1Z8 144 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 OR7C2O60412 319 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 CBLN1P23435 193 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 CHRNB4P30926 498 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 OR9G1Q8NH87 305 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 TMEM18Q96B42 140 aa11.88□□□□□ -0.51
ACTN1-211ENST00000553882 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
ACTN1-211ENST00000553882 ZZEF1O43149 2961 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 NUPR1O60356 82 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 OR10J1P30954 320 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 ZNF90Q03938 601 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 RELQ04864 619 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-211ENST00000553882 POU2AF1Q16633 256 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 ZNF664Q8N3J9 261 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 LRBAP50851 2863 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 MT-CO2P00403 227 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 CEACAM8P31997 349 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-211ENST00000553882 ADMP35318 185 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 DNLZQ5SXM8 178 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 HARBI1Q96MB7 349 aa11.87□□□□□ -0.51
ACTN1-211ENST00000553882 FRMD6-AS1P0C7T7 363 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 CRYBB3P26998 211 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 UHRF2Q96PU4 802 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 E7EUB6 86 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 FCN3O75636 299 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 CRYABP02511 175 aaKnown RBP11.86□□□□□ -0.51
ACTN1-211ENST00000553882 ERVFC1-1P60608 527 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 DIAPH2-AS1Q14236 149 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 IGF2-ASQ6U949 168 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 TMEM108Q6UXF1 575 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 FAM57AQ8TBR7 257 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
ACTN1-211ENST00000553882 CCL17Q92583 94 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 ZNF257Q9Y2Q1 563 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 LINC00312Q9Y6C7 94 aa11.86□□□□□ -0.51
ACTN1-211ENST00000553882 CSMD1Q96PZ7 3565 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 ABCA1O95477 2261 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 ADIPOQQ15848 244 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 CORO2AQ92828 525 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 ZNF503Q96F45 646 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 EAF1Q96JC9 268 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-211ENST00000553882 LINC00574Q9H8X3 128 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 A0A0G2JNJ9 132 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 SPINK4O60575 86 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 BSPH1Q075Z2 132 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 MAJINQ3KP22 176 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 DOLPP1Q86YN1 238 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 Q9UFV3 132 aa11.85□□□□□ -0.51
ACTN1-211ENST00000553882 DPRXA6NFQ7 191 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 RNASE2P10153 161 aaKnown RBP11.84□□□□□ -0.51
ACTN1-211ENST00000553882 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 CENPWQ5EE01 88 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 C10orf55Q5SWW7 151 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 OR2T6Q8NHC8 308 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 TLN1Q9Y490 2541 aaKnown RBP11.84□□□□□ -0.51
ACTN1-211ENST00000553882 C17orf100A8MU93 164 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 GCGP01275 180 aa11.84□□□□□ -0.51
ACTN1-211ENST00000553882 CD33P20138 364 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms