RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 SLC17A2O00624 439 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 DENRO43583 198 aaKnown RBP9.76□□□□□ -0.85
PRPF39-204ENST00000553605 IGKV1-13P0DP09 117 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 GNB3P16520 340 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 HSD17B12Q53GQ0 312 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 THOC7Q6I9Y2 204 aaKnown RBP9.76□□□□□ -0.85
PRPF39-204ENST00000553605 ZNF773Q6PK81 442 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 Q6ZS49 121 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 MS4A15Q8N5U1 240 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 GRAMD2BQ96HH9 432 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 GPHA2Q96T91 129 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 GINS3Q9BRX5 216 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
PRPF39-204ENST00000553605 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
PRPF39-204ENST00000553605 TEX50A0A1B0GTY4 177 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 EFCAB10A6NFE3 127 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 K7EQG2 157 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 TALDO1P37837 337 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 RAB11BQ15907 218 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 C2orf76Q3KRA6 126 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 NEU1Q99519 415 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
PRPF39-204ENST00000553605 A0A075B6Q4 140 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 CTXN2P0C2S0 81 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 MFAP4P55083 255 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 XGP55808 180 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 WNT4P56705 351 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 CLDN12P56749 244 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 TAS2R31P59538 309 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
PRPF39-204ENST00000553605 ST3GAL4Q11206 333 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 TOMM20LQ6UXN7 152 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 SPAG16Q8N0X2 631 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 C15orf53Q8NAA6 179 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 STXBP6Q8NFX7 210 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 PYDC1Q8WXC3 89 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 FAM3DQ96BQ1 224 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 GFI1Q99684 422 aa9.74□□□□□ -0.85
PRPF39-204ENST00000553605 MFNGO00587 321 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 TNFSF12O43508 249 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 FGF2P09038 288 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 NQO2P16083 231 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 OXA1LQ15070 435 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 RCN1Q15293 331 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 POU2AF1Q16633 256 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 FAM222AQ5U5X8 452 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 ZNF705AQ6ZN79 300 aaPredicted RBP9.73□□□□□ -0.85
PRPF39-204ENST00000553605 OR1L8Q8NGR8 309 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 OR10R2Q8NGX6 335 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 SLC25A46Q96AG3 418 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 TXN2Q99757 166 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 HINT2Q9BX68 163 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 TMEM140Q9NV12 185 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 RAB22AQ9UL26 194 aa9.73□□□□□ -0.85
PRPF39-204ENST00000553605 AK6Q9Y3D8 172 aaKnown RBP9.73□□□□□ -0.85
PRPF39-204ENST00000553605 ERICH4A6NGS2 130 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 SMIM9A6NGZ8 99 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 MYL12BO14950 172 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 HPRT1P00492 218 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 UCHL1P09936 223 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 HIST1H1DP16402 221 aaKnown RBP9.72□□□□□ -0.85
PRPF39-204ENST00000553605 BTF3P20290 206 aaKnown RBP9.72□□□□□ -0.85
PRPF39-204ENST00000553605 GADD45AP24522 165 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 FGF9P31371 208 aaPredicted RBP9.72□□□□□ -0.85
PRPF39-204ENST00000553605 DMBX1Q8NFW5 382 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 LSM10Q969L4 123 aaKnown RBP9.72□□□□□ -0.85
PRPF39-204ENST00000553605 DCSTAMPQ9H295 470 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 NDUFA4L2Q9NRX3 87 aa9.72□□□□□ -0.85
PRPF39-204ENST00000553605 TMEM272A0A1B0GTI8 110 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF705FA8MVS1 300 aaPredicted RBP9.71□□□□□ -0.86
PRPF39-204ENST00000553605 RBFOX2O43251 390 aaKnown RBP eCLIP9.71□□□□□ -0.86
PRPF39-204ENST00000553605 GNG7O60262 68 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF705DP0CH99 300 aaPredicted RBP9.71□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF705BP0CI00 300 aaPredicted RBP9.71□□□□□ -0.86
PRPF39-204ENST00000553605 ZNF555Q8NEP9 628 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 DCANP1Q8TF63 244 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 C9orf16Q9BUW7 83 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 MDFICQ9P1T7 246 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 RFNGQ9Y644 331 aa9.71□□□□□ -0.86
PRPF39-204ENST00000553605 A0A1W2PS18 150 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 I3L2K1 104 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 SULT1C2O00338 296 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 DTYMKP23919 212 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 GSG1LQ6UXU4 331 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 NANOGP1Q8N7R0 232 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 MISP3Q96FF7 219 aa9.7□□□□□ -0.86
PRPF39-204ENST00000553605 IGHV3OR16-12A0A075B7B8 117 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 NPPCP23582 126 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 RANBP1P43487 201 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 CCL18P55774 89 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 PSMG4Q5JS54 123 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 CNIH2Q6PI25 160 aa9.69□□□□□ -0.86
PRPF39-204ENST00000553605 OR1P1Q8NH06 330 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms