RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 C7orf50Q9BRJ6 194 aaKnown RBP17.55■□□□□ 0.4
TDP1-206ENST00000553569 PDCD10Q9BUL8 212 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 PLEKHA3Q9HB20 300 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 DMRT1Q9Y5R6 373 aa17.55■□□□□ 0.4
TDP1-206ENST00000553569 IFNA17P01571 189 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 ZP3P21754 424 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 BTCP35070 178 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 TMEM128Q5BJH2 165 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 SLC25A24Q6NUK1 477 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 ZNF429Q86V71 674 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 FAM219AQ8IW50 185 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 SLC35G3Q8N808 338 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 CCDC32Q9BV29 185 aa17.54■□□□□ 0.4
TDP1-206ENST00000553569 F11RQ9Y624 299 aaKnown RBP17.54■□□□□ 0.4
TDP1-206ENST00000553569 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.53■□□□□ 0.4
TDP1-206ENST00000553569 MFSD2BA6NFX1 497 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 CYB5BO43169 146 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 NDUFB6O95139 128 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 KLK9Q2XQG4 91 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 C9orf66Q5T8R8 295 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 Q6ZRM9 215 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 LGI3Q8N145 548 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 IL22RA2Q969J5 263 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 EEF1AKMT3Q96AZ1 226 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 GPR146Q96CH1 333 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 CACNG5Q9UF02 275 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 KLK9Q9UKQ9 250 aa17.53■□□□□ 0.4
TDP1-206ENST00000553569 MFAP2P55001 183 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 SRPXP78539 464 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 PPP1R1AQ13522 171 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 RPEL1Q2QD12 228 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 OR2C3Q8N628 320 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 CCDC140Q96MF4 163 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 THYN1Q9P016 225 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 FLVCR2Q9UPI3 526 aa17.52■□□□□ 0.4
TDP1-206ENST00000553569 PPP5D1E7EU14 171 aa17.51■□□□□ 0.39
TDP1-206ENST00000553569 BMPR1BO00238 502 aa17.51■□□□□ 0.39
TDP1-206ENST00000553569 PLA2G10O15496 165 aa17.51■□□□□ 0.39
TDP1-206ENST00000553569 HOXA1P49639 335 aaPredicted RBP17.51■□□□□ 0.39
TDP1-206ENST00000553569 CLEC19AQ6UXS0 136 aa17.51■□□□□ 0.39
TDP1-206ENST00000553569 LYRM1O43325 122 aa17.5■□□□□ 0.39
TDP1-206ENST00000553569 SYNJ2BPP57105 145 aa17.5■□□□□ 0.39
TDP1-206ENST00000553569 ERHP84090 104 aaKnown RBP17.5■□□□□ 0.39
TDP1-206ENST00000553569 LYZL2Q7Z4W2 148 aa17.5■□□□□ 0.39
TDP1-206ENST00000553569 CXorf58Q96LI9 332 aa17.5■□□□□ 0.39
TDP1-206ENST00000553569 WDR12Q9GZL7 423 aaKnown RBP17.5■□□□□ 0.39
TDP1-206ENST00000553569 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.5■□□□□ 0.39
TDP1-206ENST00000553569 IGHV3-21A0A0B4J1V1 117 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 A0A0B4J2A0 478 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 SAP30O75446 220 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 NXPH3O95157 252 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 SFT2D2O95562 160 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 KRTAP10-11P60412 298 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 ZNF846Q147U1 533 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 ANKRD55Q3KP44 614 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 FAM209BQ5JX69 171 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 OR1P1Q8NH06 330 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 ENY2Q9NPA8 101 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 SHPKQ9UHJ6 478 aa17.49■□□□□ 0.39
TDP1-206ENST00000553569 MEGF8Q7Z7M0 2845 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 TRBV7-1A0A0A6YYK4 115 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 HLA-AP01891 365 aaKnown RBP17.48■□□□□ 0.39
TDP1-206ENST00000553569 SULT1A3P0DMM9 295 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 SULT1A4P0DMN0 295 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 ARL3P36405 182 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 KLF5Q13887 457 aaPredicted RBP17.48■□□□□ 0.39
TDP1-206ENST00000553569 OR1L6Q8NGR2 347 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 MISP3Q96FF7 219 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 ZC4H2Q9NQZ6 224 aa17.48■□□□□ 0.39
TDP1-206ENST00000553569 AURKAIP1Q9NWT8 199 aaPredicted RBP17.48■□□□□ 0.39
TDP1-206ENST00000553569 GPR183P32249 361 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 SPCS3P61009 180 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 UBE2MP61081 183 aaKnown RBP17.47■□□□□ 0.39
TDP1-206ENST00000553569 EGFEM1PQ0D2K5 195 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 NMSQ5H8A3 153 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 ACSM6Q6P461 480 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 ZNF114Q8NC26 417 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 ZNF502Q8TBZ5 544 aa17.47■□□□□ 0.39
TDP1-206ENST00000553569 WIPF1O43516 503 aa17.46■□□□□ 0.39
TDP1-206ENST00000553569 GGCTO75223 188 aaKnown RBP17.46■□□□□ 0.39
TDP1-206ENST00000553569 ANXA7P20073 488 aaKnown RBP17.46■□□□□ 0.39
TDP1-206ENST00000553569 AARDQ4LEZ3 155 aa17.46■□□□□ 0.39
TDP1-206ENST00000553569 VN1R17PQ8TDU5 208 aa17.46■□□□□ 0.39
TDP1-206ENST00000553569 ELOVL1Q9BW60 279 aa17.46■□□□□ 0.39
TDP1-206ENST00000553569 PIGBOS1A0A0B4J2F0 54 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 SNCAP37840 140 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 SMCO1Q147U7 214 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 TATDN3Q17R31 274 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 OR9G4Q8NGQ1 327 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 OR52E5Q8NH55 327 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 OR4C12Q96R67 309 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 C20orf85Q9H1P6 137 aa17.45■□□□□ 0.38
TDP1-206ENST00000553569 DUXBA0A1W2PPF3 345 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 C9orf170A2RU37 121 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 CEBPZOSA8MTT3 80 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 INS-IGF2F8WCM5 200 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 K7EIM0 57 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 OR2C1O95371 312 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 CLEC3BP05452 202 aa17.44■□□□□ 0.38
TDP1-206ENST00000553569 INSL3P51460 131 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 347.2 ms