RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 Q8N402 240 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 MCUBQ9NWR8 336 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 DMRT1Q9Y5R6 373 aa11.71□□□□□ -0.53
SHMT2-204ENST00000553324 PPP5D1E7EU14 171 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 OR2C1O95371 312 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 CDS2O95674 445 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 CSN3P07498 182 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 SP6Q3SY56 376 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 OR2K2Q8NGT1 345 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 OR1P1Q8NH06 330 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 PDCD10Q9BUL8 212 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 C5orf66Q9H5L9 145 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 SMAD5-AS1Q9Y6J3 95 aa11.7□□□□□ -0.54
SHMT2-204ENST00000553324 PIGBOS1A0A0B4J2F0 54 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 DBX1A6NMT0 343 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 NHLRC4P0CG21 123 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-204ENST00000553324 ETV6P41212 452 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 PLET1Q6UQ28 207 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 CCDC190Q86UF4 302 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 OR2C3Q8N628 320 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
SHMT2-204ENST00000553324 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 CCDC140Q96MF4 163 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 PLEKHA3Q9HB20 300 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 GAR1Q9NY12 217 aaKnown RBP11.69□□□□□ -0.54
SHMT2-204ENST00000553324 CACFD1Q9UGQ2 172 aa11.69□□□□□ -0.54
SHMT2-204ENST00000553324 A0A0B4J293 547 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 MFSD2BA6NFX1 497 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 CRYM-AS1A6NIL9 109 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 IFNA17P01571 189 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 P0C879 139 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 LCN12Q6JVE5 192 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 SPSB3Q6PJ21 355 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 ZNF114Q8NC26 417 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 GLYATL2Q8WU03 294 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
SHMT2-204ENST00000553324 V9GYH0 126 aa11.68□□□□□ -0.54
SHMT2-204ENST00000553324 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 HLA-AP01891 365 aaKnown RBP11.67□□□□□ -0.54
SHMT2-204ENST00000553324 SNCAP37840 140 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 SUB1P53999 127 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-204ENST00000553324 KLF9Q13886 244 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-204ENST00000553324 GALNT14Q96FL9 552 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 BSCL2Q96G97 398 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-204ENST00000553324 PALMDQ9NP74 551 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 C21orf62Q9NYP8 219 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 TECRQ9NZ01 308 aaKnown RBP11.67□□□□□ -0.54
SHMT2-204ENST00000553324 S4R3C0 116 aa11.67□□□□□ -0.54
SHMT2-204ENST00000553324 SORL1Q92673 2214 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 ANXA3P12429 323 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 GPR183P32249 361 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 OR52E5Q8NH55 327 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 DYNLRB2Q8TF09 96 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 SCARB1Q8WTV0 552 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 IL22RA2Q969J5 263 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 TXN2Q99757 166 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 SLC25A21Q9BQT8 299 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-204ENST00000553324 ENY2Q9NPA8 101 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-204ENST00000553324 TMEM56-RWDD3S4R434 201 aa11.66□□□□□ -0.54
SHMT2-204ENST00000553324 C2orf70A6NJV1 201 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 TGOLN2O43493 480 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 FOLR2P14207 255 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 MFAP2P55001 183 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 ELLP55199 621 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-204ENST00000553324 ZNF79Q15937 498 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 IZUMO4Q1ZYL8 232 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 GTSCR1Q86UQ5 136 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 SELENOHQ8IZQ5 122 aaKnown RBP11.65□□□□□ -0.54
SHMT2-204ENST00000553324 MARC2Q969Z3 335 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 UFC1Q9Y3C8 167 aa11.65□□□□□ -0.54
SHMT2-204ENST00000553324 A8MWP6 167 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 K7EIM0 57 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 CORTO00230 105 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 AKR1C4P17516 323 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 CBLN1P23435 193 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-204ENST00000553324 INPP1P49441 399 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 MFAP4P55083 255 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 SPCS3P61009 180 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 SRPXP78539 464 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 DEFB114Q30KQ6 69 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 HAPLN4Q86UW8 402 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 MISP3Q96FF7 219 aa11.64□□□□□ -0.55
SHMT2-204ENST00000553324 ZNF436Q9C0F3 470 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-204ENST00000553324 DNAH9Q9NYC9 4486 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms