RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ANKRD20A5PA0PJZ0 165 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 TMEM213A2RRL7 107 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 DISC1C4P0D8 188 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 SERPINE2P07093 398 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 FGF2P09038 288 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 PIGPP57054 158 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 RND3P61587 244 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 TM4SF20Q53R12 229 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 THOC7Q6I9Y2 204 aaKnown RBP11.98□□□□□ -0.49
CDK4-215ENST00000553237 PLET1Q6UQ28 207 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 UNQ9165/PRO28630Q6UXU0 137 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 DEFB125Q8N687 156 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 GDPD1Q8N9F7 314 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 OR4C16Q8NGL9 310 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 ZFAND1Q8TCF1 268 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 MARCH1Q8TCQ1 289 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 ZNF486Q96H40 463 aaPredicted RBP11.98□□□□□ -0.49
CDK4-215ENST00000553237 WFDC10AQ9H1F0 79 aa11.98□□□□□ -0.49
CDK4-215ENST00000553237 FAM212BQ9NTI7 297 aaPredicted RBP11.98□□□□□ -0.49
CDK4-215ENST00000553237 TECRQ9NZ01 308 aaKnown RBP11.98□□□□□ -0.49
CDK4-215ENST00000553237 DBX1A6NMT0 343 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 CYB5BO43169 146 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDK4-215ENST00000553237 MFAP2P55001 183 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 PYDC2Q56P42 97 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 ZNF57Q68EA5 555 aaPredicted RBP11.97□□□□□ -0.49
CDK4-215ENST00000553237 OR13C8Q8NGS7 320 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 MRGPRFQ96AM1 343 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 CITED4Q96RK1 184 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 SPATA25Q9BR10 227 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 MLXQ9UH92 298 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 V9GYH0 126 aa11.97□□□□□ -0.49
CDK4-215ENST00000553237 IGKV1-39P01597 117 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 IGKV1D-39P04432 117 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 CASC10Q5T4H9 136 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 HSD17B13Q7Z5P4 300 aaPredicted RBP11.96□□□□□ -0.49
CDK4-215ENST00000553237 CCDC190Q86UF4 302 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 OR51S1Q8NGJ8 323 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 VN1R17PQ8TDU5 208 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 LSM10Q969L4 123 aaKnown RBP11.96□□□□□ -0.49
CDK4-215ENST00000553237 COPZ2Q9P299 210 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 PRNDQ9UKY0 176 aa11.96□□□□□ -0.49
CDK4-215ENST00000553237 F11RQ9Y624 299 aaKnown RBP11.96□□□□□ -0.49
CDK4-215ENST00000553237 OR2T8A6NH00 312 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 A8MWP6 167 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 OR11H12B2RN74 326 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 TGOLN2O43493 480 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 SCAF4O95104 1147 aaKnown RBP11.95□□□□□ -0.5
CDK4-215ENST00000553237 CTSDP07339 412 aaPredicted RBP11.95□□□□□ -0.5
CDK4-215ENST00000553237 LYL1P12980 280 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 BTNL8Q6UX41 500 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 TMEM61Q8N0U2 210 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 CADM3Q8N126 398 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 SEC22AQ96IW7 307 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 TP53RKQ96S44 253 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 PRRT1Q99946 306 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 RETNQ9HD89 108 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 TMEM14BQ9NUH8 114 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 FKBP11Q9NYL4 201 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 NDUFA13Q9P0J0 144 aa11.95□□□□□ -0.5
CDK4-215ENST00000553237 C3orf85A0A1B0GTC6 90 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 C15orf61A6NNL5 157 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 SURF2Q15527 256 aaPredicted RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 ZNF79Q15937 498 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 SP6Q3SY56 376 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 LINC00322Q6ZN03 302 aaPredicted RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 H2BFWTQ7Z2G1 175 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 CCDC71LQ8N9Z2 235 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 OR5B3Q8NH48 314 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 OR4A16Q8NH70 328 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 SCARB1Q8WTV0 552 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 TSC22D3Q99576 134 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 RTBDNQ9BSG5 229 aaPredicted RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 EDA2RQ9HAV5 297 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 MCUBQ9NWR8 336 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 C21orf62Q9NYP8 219 aa11.94□□□□□ -0.5
CDK4-215ENST00000553237 C14orf166Q9Y224 244 aaKnown RBP11.94□□□□□ -0.5
CDK4-215ENST00000553237 ETV6P41212 452 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 SPANXN2Q5MJ10 180 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 UBAC2Q8NBM4 344 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 CHRDL1Q9BU40 450 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 ZNF436Q9C0F3 470 aaPredicted RBP11.93□□□□□ -0.5
CDK4-215ENST00000553237 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 SCP2D1Q9UJQ7 156 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 UFC1Q9Y3C8 167 aa11.93□□□□□ -0.5
CDK4-215ENST00000553237 DNAH7Q8WXX0 4024 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 IGHV3OR16-8A0A075B7F1 116 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 K7EIM0 57 aa11.92□□□□□ -0.5
CDK4-215ENST00000553237 C8orf88P0DMB2 117 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms