RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 STPG3Q8N7X2 389 aa11.9□□□□□ -0.5
CALCOCO1-220ENST00000552282 DGCR14Q96DF8 476 aaKnown RBP11.9□□□□□ -0.5
CALCOCO1-220ENST00000552282 TMEM56Q96MV1 263 aa11.9□□□□□ -0.5
CALCOCO1-220ENST00000552282 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
CALCOCO1-220ENST00000552282 PRNDQ9UKY0 176 aa11.9□□□□□ -0.5
CALCOCO1-220ENST00000552282 CMC4P56277 68 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 TAS2R46P59540 309 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 CMTM1Q8IZ96 169 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 FCAMRQ8WWV6 532 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 TXN2Q99757 166 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 ZNF2Q9BSG1 426 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 FXYD6Q9H0Q3 95 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 SMPXQ9UHP9 88 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 KLK5Q9Y337 293 aaPredicted RBP11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
CALCOCO1-220ENST00000552282 GPR31O00270 319 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 LY6G6CO95867 125 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 RELQ04864 619 aaPredicted RBP11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 UBE2NLQ5JXB2 153 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 FAM90A2PQ658T7 463 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 GATAD1Q8WUU5 269 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 S100A16Q96FQ6 103 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 C11orf68Q9H3H3 251 aaKnown RBP11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 IFT46Q9NQC8 304 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
CALCOCO1-220ENST00000552282 IGHV7-4-1A0A0J9YVY3 117 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 LOC100506127A0A0U1RQW1 187 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 I3L2K1 104 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 CHEK1O14757 476 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 SNAPC5O75971 98 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 KRASP01116 189 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 CD5P06127 495 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 CTSDP07339 412 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 LPAR6P43657 344 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 RFX2P48378 723 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 TAS2R20P59543 309 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 KCTD21Q4G0X4 260 aa11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 C6orf62Q9GZU0 229 aaPredicted RBP11.87□□□□□ -0.51
CALCOCO1-220ENST00000552282 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 ATP6V1G2O95670 118 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 RPA2P15927 270 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 G6PCP35575 357 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 OR5H2Q8NGV7 314 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 SEC22AQ96IW7 307 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 RNF2Q99496 336 aa11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 NXF2Q9GZY0 626 aaKnown RBP11.86□□□□□ -0.51
CALCOCO1-220ENST00000552282 TRAV2A0A0B4J234 112 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 MEIS3P1A6NDR6 274 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 INS-IGF2F8WCM5 200 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 NUPL2O15504 423 aaKnown RBP11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 UCP3P55916 312 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 PRCDQ00LT1 54 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 TMEM69Q5SWH9 247 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 LPCAT3Q6P1A2 487 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 RHPN1-AS1Q9BWJ2 59 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 NSG2Q9Y328 171 aa11.85□□□□□ -0.51
CALCOCO1-220ENST00000552282 FCER2P06734 321 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 MFAP4P55083 255 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 Q56UQ5 140 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 PVRIGQ6DKI7 326 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 LYSMD2Q8IV50 215 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 TMEM116Q8NCL8 245 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 PHLDA1Q8WV24 401 aaPredicted RBP11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 CSTL1Q9H114 145 aa11.84□□□□□ -0.51
CALCOCO1-220ENST00000552282 IGHV3-21A0A0B4J1V1 117 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 MPTX1A8MV57 137 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 IGKV1-39P01597 117 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 PMP2P02689 132 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 IGKV1D-39P04432 117 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 PRSS3P35030 304 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 HRH1P35367 487 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 TCTAP57738 103 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 UBAC2Q8NBM4 344 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 CMTM3Q96MX0 182 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 HINT2Q9BX68 163 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 MFFQ9GZY8 342 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 VSIRQ9H7M9 311 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 SCPEP1Q9HB40 452 aa11.83□□□□□ -0.52
CALCOCO1-220ENST00000552282 DFFBO76075 338 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 S100GP29377 79 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 RPS19P39019 145 aaKnown RBP11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 NEDD8Q15843 81 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 SAMD12Q8N8I0 201 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 TSPAN14Q8NG11 270 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 GINS3Q9BRX5 216 aa11.82□□□□□ -0.52
CALCOCO1-220ENST00000552282 IGHV3OR16-8A0A075B7F1 116 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 TRAV14DV4A0A0A6YYC5 116 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 ZNF207O43670 478 aaKnown RBP11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 MT-CO2P00403 227 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 P0C879 139 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 RND3P61587 244 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 HSPE1P61604 102 aaKnown RBP11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
CALCOCO1-220ENST00000552282 APRG1Q8IVJ8 170 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms