RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 PRB3Q04118 309 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 GAMTQ14353 236 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 HABP2Q14520 560 aaPredicted RBP11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 DTX2Q86UW9 622 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 ABHD5Q8WTS1 349 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 CXorf1O96002 111 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 RAB5BP61020 215 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 CD69Q07108 199 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 MLANAQ16655 118 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 MRGPRG-AS1Q2M3A8 158 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 ZFP82Q8N141 532 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 TEX45Q8NA69 505 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 MALSU1Q96EH3 234 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 NAT8Q9UHE5 227 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 INSIG2Q9Y5U4 225 aa11.31□□□□□ -0.6
RAB3IP-216ENST00000552199 RELNP78509 3460 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 LRBAP50851 2863 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 C22orf46C9J442 243 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 C11orf94C9JXX5 98 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 ARL14EPLP0DKL9 152 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 COX7A1P24310 79 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 RHOBP62745 196 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 WT1-ASQ06250 92 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 ZNF674Q2M3X9 581 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 C4orf17Q53FE4 359 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 CYP2G1PQ6ZSU1 146 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 CACNG8Q8WXS5 425 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 RPUSD4Q96CM3 377 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 PARLQ9H300 379 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 SAV1Q9H4B6 383 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 TPSG1Q9NRR2 321 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 ONECUT1Q9UBC0 465 aa11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 AMMECR1Q9Y4X0 333 aaPredicted RBP11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
RAB3IP-216ENST00000552199 ITPR1Q14643 2758 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 AGAP20933 346 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 SPNS3Q6ZMD2 512 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 C2CD4CQ8TF44 421 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 ITLN2Q8WWU7 325 aaPredicted RBP11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 TMEM242Q9NWH2 141 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 A0A1W2PPR1 153 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 LY6LH3BQJ8 138 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 CRYGBP07316 175 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 SUB1P53999 127 aaKnown RBP eCLIP11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 UBE2G2P60604 165 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 ELOBQ15370 118 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 SPATA31B1PQ5VZV4 182 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 ZNF343Q6P1L6 599 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 PNKDQ8N490 385 aa11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
RAB3IP-216ENST00000552199 PDE6DO43924 150 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 NPPCP23582 126 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 OR10J1P30954 320 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 UQCRFS1P47985 274 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 PRSS8Q16651 343 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 SLC16A13Q7RTY0 426 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 NANPQ8TBE9 248 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 RNASEH2CQ8TDP1 164 aaKnown RBP11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 Q8WTZ3 238 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 HRNRQ86YZ3 2850 aaPredicted RBP11.28□□□□□ -0.6
RAB3IP-216ENST00000552199 GNLYP22749 145 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 CNTFRP26992 372 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 GCHFRP30047 84 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 ATP5G3P48201 142 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 PSG5Q15238 335 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 RPEQ96AT9 228 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 TXNDC17Q9BRA2 123 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 CTDSP1Q9GZU7 261 aa11.27□□□□□ -0.6
RAB3IP-216ENST00000552199 LOC105371242A0A075B767 164 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 F6UZH7 168 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 CLDN34H7C241 214 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 RND2P52198 227 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 ARF6P62330 175 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 ADIRFQ15847 76 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 SSBP3Q9BWW4 388 aaPredicted RBP11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 PRELID1Q9Y255 219 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 SIGLEC9Q9Y336 463 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 URGCP-MRPS24S4R325 110 aa11.27□□□□□ -0.61
RAB3IP-216ENST00000552199 DCHS2Q6V1P9 2916 aa11.26□□□□□ -0.61
RAB3IP-216ENST00000552199 M0R1W7 72 aa11.26□□□□□ -0.61
RAB3IP-216ENST00000552199 FOXH1O75593 365 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms