RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 CMTM3Q96MX0 182 aa11.9□□□□□ -0.5
RAB5C-209ENST00000552162 HRH4Q9H3N8 390 aa11.9□□□□□ -0.5
RAB5C-209ENST00000552162 NDUFA4L2Q9NRX3 87 aa11.9□□□□□ -0.5
RAB5C-209ENST00000552162 COMMD9Q9P000 198 aa11.9□□□□□ -0.5
RAB5C-209ENST00000552162 IGHV3OR16-13A0A075B7E8 117 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 IGHV3-74A0A0B4J1X5 117 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 MARCH11A6NNE9 402 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 AQP4P55087 323 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 ERVK-16P61578 105 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 AADACL3Q5VUY0 350 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 FAM90A2PQ658T7 463 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 Q8NAQ8 132 aa11.89□□□□□ -0.51
RAB5C-209ENST00000552162 DNAH17Q9UFH2 4485 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 C15orf61A6NNL5 157 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 NOTOA8MTQ0 251 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 NUPL2O15504 423 aaKnown RBP11.88□□□□□ -0.51
RAB5C-209ENST00000552162 YIF1AO95070 293 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 TMEM17Q86X19 198 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 LGALS14Q8TCE9 139 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 MUC4Q99102 2169 aa11.88□□□□□ -0.51
RAB5C-209ENST00000552162 ABCA13Q86UQ4 5058 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 IGHV4-4A0A075B6R2 117 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 LEMD1Q68G75 181 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 HOGA1Q86XE5 327 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 RHBDL2Q9NX52 303 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 DAPK2Q9UIK4 370 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 OR51B2Q9Y5P1 312 aa11.87□□□□□ -0.51
RAB5C-209ENST00000552162 IGHV4-28A0A0C4DH34 117 aa11.86□□□□□ -0.51
RAB5C-209ENST00000552162 RBMY1A1P0DJD3 496 aaKnown RBP11.86□□□□□ -0.51
RAB5C-209ENST00000552162 RBMY1CP0DJD4 496 aa11.86□□□□□ -0.51
RAB5C-209ENST00000552162 HLA-DMBP28068 263 aa11.86□□□□□ -0.51
RAB5C-209ENST00000552162 DEFB131AP59861 70 aa11.86□□□□□ -0.51
RAB5C-209ENST00000552162 RBMY1FQ15415 496 aaKnown RBP11.86□□□□□ -0.51
RAB5C-209ENST00000552162 Q6ZTC4 211 aa11.86□□□□□ -0.51
RAB5C-209ENST00000552162 DGCR14Q96DF8 476 aaKnown RBP11.86□□□□□ -0.51
RAB5C-209ENST00000552162 TRAV10A0A0B4J240 114 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 DFFBO76075 338 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 RLN1P04808 185 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 CD5P06127 495 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 EIF4EP06730 217 aaKnown RBP11.85□□□□□ -0.51
RAB5C-209ENST00000552162 FCER2P06734 321 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 OR1P1Q8NH06 330 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 SLC25A46Q96AG3 418 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 TMEM56Q96MV1 263 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 NXF2Q9GZY0 626 aaKnown RBP11.85□□□□□ -0.51
RAB5C-209ENST00000552162 MS4A6AQ9H2W1 248 aa11.85□□□□□ -0.51
RAB5C-209ENST00000552162 DYNC1H1Q14204 4646 aaKnown RBP11.84□□□□□ -0.51
RAB5C-209ENST00000552162 TRAV18A0A075B6X5 111 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 I3L2K1 104 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 DNASE2O00115 360 aaPredicted RBP11.84□□□□□ -0.51
RAB5C-209ENST00000552162 ST8SIA3O43173 380 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 SNAPC5O75971 98 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 KRASP01116 189 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 F2RP25116 425 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 GNRHRP30968 328 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 G6PCP35575 357 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 MFAP4P55083 255 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 HERV-K104P61576 105 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 SFXN4Q6P4A7 337 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 STHQ8IWL8 128 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 FAM24BQ8N5W8 94 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 GIMAP1Q8WWP7 306 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 FCAMRQ8WWV6 532 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 ST8SIA2Q92186 375 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 BORCS5Q969J3 196 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 GINS3Q9BRX5 216 aa11.84□□□□□ -0.51
RAB5C-209ENST00000552162 RRP15Q9Y3B9 282 aaKnown RBP11.84□□□□□ -0.51
RAB5C-209ENST00000552162 PKD1P98161 4303 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 MIFP14174 115 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 LPAR6P43657 344 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 PVRIGQ6DKI7 326 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 CENPSQ8N2Z9 138 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 TXN2Q99757 166 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 RNF126Q9BV68 326 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 VSIRQ9H7M9 311 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 TXNL4BQ9NX01 149 aaKnown RBP11.83□□□□□ -0.52
RAB5C-209ENST00000552162 PRNDQ9UKY0 176 aa11.83□□□□□ -0.52
RAB5C-209ENST00000552162 DNAH11Q96DT5 4516 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 TRAV2A0A0B4J234 112 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 DBX1A6NMT0 343 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 RTL8CO15255 209 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 GNG7O60262 68 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 MT-CO2P00403 227 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 IGHV3-48P01763 117 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 APOHP02749 345 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-209ENST00000552162 GIG44P09565 113 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-209ENST00000552162 FGF9P31371 208 aaPredicted RBP11.82□□□□□ -0.52
RAB5C-209ENST00000552162 RPL11P62913 178 aaKnown RBP11.82□□□□□ -0.52
RAB5C-209ENST00000552162 TMEM41BQ5BJD5 291 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 TPRA1Q86W33 373 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 CADM3Q8N126 398 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 LILRB2Q8N423 598 aa11.82□□□□□ -0.52
RAB5C-209ENST00000552162 TSPAN14Q8NG11 270 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms