RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 LRTM2Q8N967 370 aa11.71□□□□□ -0.53
SMARCD1-211ENST00000551497 NECAP1Q8NC96 275 aa11.71□□□□□ -0.53
SMARCD1-211ENST00000551497 OR52B4Q8NGK2 314 aa11.71□□□□□ -0.53
SMARCD1-211ENST00000551497 USMG5Q96IX5 58 aa11.71□□□□□ -0.53
SMARCD1-211ENST00000551497 S4R3C0 116 aa11.71□□□□□ -0.53
SMARCD1-211ENST00000551497 IGLV11-55A0A075B6I3 123 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 IGHV4OR15-8A0A075B7B6 117 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 A0A087WW49 117 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 TRBV12-3P01733 135 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 HOXB5P09067 269 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 SULT1A3P0DMM9 295 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 SULT1A4P0DMN0 295 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 KLK9Q2XQG4 91 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 C15orf32Q32M92 178 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 SLC25A24Q6NUK1 477 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 ZNF343Q6P1L6 599 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 HSD17B13Q7Z5P4 300 aaPredicted RBP11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 NRARPQ7Z6K4 114 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 WFDC9Q8NEX5 89 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 PLEKHA3Q9HB20 300 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 TRRAPQ9Y4A5 3859 aa11.7□□□□□ -0.54
SMARCD1-211ENST00000551497 FAM223BA6NKX1 122 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 DUS4LO95620 317 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 DHFRP00374 187 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 IGHV3-23P01764 117 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 HSPB1P04792 205 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 SMCO1Q147U7 214 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 C11orf87Q6NUJ2 197 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 FAM223AQ8IWN6 122 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 DPF1Q92782 380 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 SEC22CQ9BRL7 303 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 PDCD10Q9BUL8 212 aa11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 F11RQ9Y624 299 aaKnown RBP11.69□□□□□ -0.54
SMARCD1-211ENST00000551497 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 A0A1B0GU03 582 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 ADAP1O75689 374 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 HIST1H1BP16401 226 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 CD33P20138 364 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 SLURP1P55000 103 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 SPCS3P61009 180 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 ERHP84090 104 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 ZNF616Q08AN1 781 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 FHL3Q13643 280 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 EXOSC2Q13868 293 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 GGNBP1Q5YKI7 109 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 OR52E5Q8NH55 327 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 ENKURQ8TC29 256 aa11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 PEF1Q9UBV8 284 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-211ENST00000551497 IGHV3-21A0A0B4J1V1 117 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 DUXBA0A1W2PPF3 345 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 MFSD2BA6NFX1 497 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 MPTX1A8MV57 137 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 LINC01619G3V211 115 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 PITX3O75364 302 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 IGLL1P15814 213 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 HOXA1P49639 335 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 DUSP18Q8NEJ0 188 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 OR1S1Q8NH92 325 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 COQ8AQ8NI60 647 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 DCUN1D4Q92564 292 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 DLX4Q92988 240 aaPredicted RBP11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 TMED3Q9Y3Q3 217 aa11.67□□□□□ -0.54
SMARCD1-211ENST00000551497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 CEBPZOSA8MTT3 80 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 INS-IGF2F8WCM5 200 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 SPNP16150 400 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 DEFA1P59665 94 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 DEFA3P59666 94 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 MITD1Q8WV92 249 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 RANGRFQ9HD47 186 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 ENY2Q9NPA8 101 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 MGAM2Q2M2H8 2515 aa11.66□□□□□ -0.54
SMARCD1-211ENST00000551497 PIGBOS1A0A0B4J2F0 54 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 G3V4G9 280 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 OR8U8P0C7N1 319 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 RNASE2P10153 161 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 HOXD3P31249 432 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 SNCAP37840 140 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 CLEC19AQ6UXS0 136 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 C1QL4Q86Z23 238 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 UXS1Q8NBZ7 420 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 SCARB1Q8WTV0 552 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 MISP3Q96FF7 219 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 CCDC140Q96MF4 163 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 RBKSQ9H477 322 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 HEYLQ9NQ87 328 aaPredicted RBP11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 THYN1Q9P016 225 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 HSPB7Q9UBY9 170 aa11.65□□□□□ -0.54
SMARCD1-211ENST00000551497 PPP5D1E7EU14 171 aa11.64□□□□□ -0.55
SMARCD1-211ENST00000551497 K7EIM0 57 aa11.64□□□□□ -0.55
SMARCD1-211ENST00000551497 BMPR1BO00238 502 aa11.64□□□□□ -0.55
SMARCD1-211ENST00000551497 CYB5BO43169 146 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms