RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MUC7Q8TAX7 377 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 DYNC2LI1Q8TCX1 351 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 DYNLRB2Q8TF09 96 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 AP3S1Q92572 193 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 CITED4Q96RK1 184 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 RETNQ9HD89 108 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 TECRQ9NZ01 308 aaKnown RBP9.77□□□□□ -0.85
NPAS3-209ENST00000551008 PRNDQ9UKY0 176 aa9.77□□□□□ -0.85
NPAS3-209ENST00000551008 A0A0G2JRQ6 117 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 OR2T8A6NH00 312 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 SNAPC5O75971 98 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 PPP5CP53041 499 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 SLC25A24Q6NUK1 477 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 FAAP20Q6NZ36 180 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 LPCAT3Q6P1A2 487 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 BTNL8Q6UX41 500 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 HSD17B13Q7Z5P4 300 aaPredicted RBP9.76□□□□□ -0.85
NPAS3-209ENST00000551008 CLVS1Q8IUQ0 354 aaPredicted RBP9.76□□□□□ -0.85
NPAS3-209ENST00000551008 ARRDC1Q8N5I2 433 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 OR2C3Q8N628 320 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 TMEM229BQ8NBD8 167 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 SCARB1Q8WTV0 552 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 TMEM190Q8WZ59 177 aa9.76□□□□□ -0.85
NPAS3-209ENST00000551008 ZNF320A2RRD8 509 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 GABARAPH6UMI1 98 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 I3L2K1 104 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 TBPP20226 339 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 PIGPP57054 158 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 PRCDQ00LT1 54 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 FAM106AQ4KMX7 169 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 CASC10Q5T4H9 136 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 PLET1Q6UQ28 207 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 OR13C8Q8NGS7 320 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 LYSTQ99698 3801 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 HIPK2Q9H2X6 1198 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 ZMAT4Q9H898 229 aa9.75□□□□□ -0.85
NPAS3-209ENST00000551008 IGHV3OR16-8A0A075B7F1 116 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 A0A0B4J293 547 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 PGAM2P15259 253 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 GUCA2BQ16661 112 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 SP6Q3SY56 376 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 SPINK9Q5DT21 86 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 ZNF57Q68EA5 555 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-209ENST00000551008 STEAP1BQ6NZ63 245 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 ZNF114Q8NC26 417 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 OR1P1Q8NH06 330 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 MARCH1Q8TCQ1 289 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 SMIM4Q8WVI0 70 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 BSCL2Q96G97 398 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-209ENST00000551008 ZNF486Q96H40 463 aaPredicted RBP9.74□□□□□ -0.85
NPAS3-209ENST00000551008 TSC22D3Q99576 134 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 SPATA25Q9BR10 227 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 FKBP11Q9NYL4 201 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 C21orf62Q9NYP8 219 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 THYN1Q9P016 225 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 CCDC59Q9P031 241 aaKnown RBP9.74□□□□□ -0.85
NPAS3-209ENST00000551008 CEPT1Q9Y6K0 416 aa9.74□□□□□ -0.85
NPAS3-209ENST00000551008 RYR2Q92736 4967 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 OR11H12B2RN74 326 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 SCAF4O95104 1147 aaKnown RBP9.73□□□□□ -0.85
NPAS3-209ENST00000551008 RAB3DO95716 219 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 IGHV3-48P01763 117 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 CTSGP08311 255 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 UCP1P25874 307 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 ELLP55199 621 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-209ENST00000551008 HSPE1P61604 102 aaKnown RBP9.73□□□□□ -0.85
NPAS3-209ENST00000551008 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 TERB2Q8NHR7 220 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 LHFPL5Q8TAF8 219 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 RAB2BQ8WUD1 216 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 TMEM56Q96MV1 263 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 ATP6V0BQ99437 205 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 FAM110AQ9BQ89 295 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 SOSTQ9BQB4 213 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
NPAS3-209ENST00000551008 SLIRPQ9GZT3 109 aaKnown RBP9.73□□□□□ -0.85
NPAS3-209ENST00000551008 TUBA4BQ9H853 241 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 SRD5A3Q9H8P0 318 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 SLC2A8Q9NY64 477 aa9.73□□□□□ -0.85
NPAS3-209ENST00000551008 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 C3orf85A0A1B0GTC6 90 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 H3BMQ9 156 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 CTDSPLO15194 276 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 RGS5O15539 181 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 ST8SIA3O43173 380 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 IFNA6P05013 189 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 S100GP29377 79 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 TMBIM6P55061 237 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 TAS2R19P59542 299 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 Q6ZRM9 215 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 OR4C16Q8NGL9 310 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 MARC2Q969Z3 335 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 GAR1Q9NY12 217 aaKnown RBP9.72□□□□□ -0.85
NPAS3-209ENST00000551008 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
NPAS3-209ENST00000551008 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
NPAS3-209ENST00000551008 INS-IGF2F8WCM5 200 aa9.71□□□□□ -0.86
NPAS3-209ENST00000551008 NDUFA4O00483 81 aa9.71□□□□□ -0.86
NPAS3-209ENST00000551008 ZNF207O43670 478 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms