RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 CPNE2Q96FN4 548 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 GPER1Q99527 375 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 SULT4A1Q9BR01 284 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 GABARAPL3Q9BY60 117 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 PLGRKTQ9HBL7 147 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 TMEM138Q9NPI0 162 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 PAK1IP1Q9NWT1 392 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 TAS2R4Q9NYW5 299 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 PIPOXQ9P0Z9 390 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 ZNF230Q9UIE0 474 aaPredicted RBP2.59□□□□□ -1.99
LIMA1-206ENST00000550611 KLK9Q9UKQ9 250 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 WDR83OSQ9Y284 106 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 WASHC3Q9Y3C0 194 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 PEX16Q9Y5Y5 336 aa2.59□□□□□ -1.99
LIMA1-206ENST00000550611 KIR2DL5BA0A0G2JN68 375 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KIR2DL5BA0A0G2JPC4 375 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TRBV5-5A0A0J9YX44 114 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 LOC100506127A0A0U1RQW1 187 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SMIM31A0A1B0GVY4 71 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 RAB19A4D1S5 217 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SRRM4A7MD48 611 aaKnown RBP2.58□□□□□ -2
LIMA1-206ENST00000550611 WRBO00258 174 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 RTL8CO15255 209 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DCTN3O75935 186 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 NAPSAO96009 420 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 C8orf88P0DMB2 117 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SERPINA2P20848 420 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 CBLN1P23435 193 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 PTBP1P26599 531 aaKnown RBP eCLIP2.58□□□□□ -2
LIMA1-206ENST00000550611 CAPGP40121 348 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 LGALS7P47929 136 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TCTAP57738 103 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 RPS11P62280 158 aaKnown RBP eCLIP2.58□□□□□ -2
LIMA1-206ENST00000550611 GNGT1P63211 74 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DLK1P80370 383 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DEFA5Q01523 94 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GAGE5Q13069 117 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GAGE6Q13070 117 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GPR176Q14439 515 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 PLGLAQ15195 96 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 ATP6AP1Q15904 470 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GUCA2BQ16661 112 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 CNPY1Q3B7I2 92 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DNAL1Q4LDG9 190 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SLC22A6Q4U2R8 563 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DDI2Q5TDH0 399 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 XAF1Q6GPH4 301 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 RPL22L1Q6P5R6 122 aaKnown RBP2.58□□□□□ -2
LIMA1-206ENST00000550611 GLIPR1L1Q6UWM5 242 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TMEM182Q6ZP80 229 aaPredicted RBP2.58□□□□□ -2
LIMA1-206ENST00000550611 SLC16A13Q7RTY0 426 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TPRA1Q86W33 373 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 PDPNQ86YL7 162 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GPHB5Q86YW7 130 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KRTAP7-1Q8IUC3 87 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SLC38A6Q8IZM9 456 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TMEM61Q8N0U2 210 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KIR2DL5AQ8N109 375 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.58□□□□□ -2
LIMA1-206ENST00000550611 NHLRC2Q8NBF2 726 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KIR2DL5BQ8NHK3 375 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GRPEL2Q8TAA5 225 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KCNG3Q8TAE7 436 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 GPR148Q8TDV2 347 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 NEK7Q8TDX7 302 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 PTX4Q96A99 478 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 ABHD14BQ96IU4 210 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TSNAXQ99598 290 aaKnown RBP2.58□□□□□ -2
LIMA1-206ENST00000550611 THTPAQ9BU02 230 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 DNAJC4Q9NNZ3 241 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 ZNF355PQ9NSJ1 428 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 KCNIP1Q9NZI2 227 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 MLXQ9UH92 298 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 ENOPH1Q9UHY7 261 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 APLNQ9ULZ1 77 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 POMPQ9Y244 141 aa2.58□□□□□ -2
LIMA1-206ENST00000550611 TRAV8-7A0A075B6U6 113 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 TRBV6-6A0A0A6YYG2 114 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 TRAV25A0A0B4J276 109 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 IGKV1-6A0A0C4DH72 117 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 ZNF320A2RRD8 509 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 TMEM213A2RRL7 107 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 A4D1N5 150 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 FAM223BA6NKX1 122 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 A8MWP6 167 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 H7C2Y5 167 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 M0R2N4 97 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 ST8SIA3O43173 380 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 DENRO43583 198 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 GGCTO75223 188 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 PDCD6O75340 191 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 CIB2O75838 187 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 CCNKO75909 580 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 RAB3DO95716 219 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 HLA-AP01891 365 aaKnown RBP2.57□□□□□ -2
LIMA1-206ENST00000550611 PRH1P02810 166 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 RLN1P04808 185 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 CD2P06729 351 aa2.57□□□□□ -2
LIMA1-206ENST00000550611 OR9G9P0C7N8 305 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms