RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 PTHLHP12272 177 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 SDC2P34741 201 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 CBX5P45973 191 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 FXYD4P59646 89 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 AADACL3Q5VUY0 350 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 LAMTOR1Q6IAA8 161 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 ZNF773Q6PK81 442 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 ZNF818PQ6ZRF7 136 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 KIR2DL5AQ8N109 375 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 CADM3Q8N126 398 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 OR5AP2Q8NGF4 316 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 OR5H6Q8NGV6 325 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 OR51H1Q8NH63 302 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 KIR2DL5BQ8NHK3 375 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 DIABLOQ9NR28 239 aa5.66□□□□□ -1.5
NEK3-201ENST00000550331 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 TRAV3A0A0B4J244 114 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 IGHV3-35A0A0C4DH35 117 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 A0A0J9YWU9 116 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 OR2T8A6NH00 312 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 OR4C46A6NHA9 309 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 MARCH11A6NNE9 402 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 C15orf62A8K5M9 175 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 K7EMT4 169 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 NDUFA4O00483 81 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 S1PR2O95136 353 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 TRAPPC2P0DI81 140 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 TRAPPC2BP0DI82 140 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 OR13C7P0DN81 318 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 HERV-K104P61576 105 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 ERVK-16P61578 105 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 MXD1Q05195 221 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 WT1-ASQ06250 92 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 PMS2P11Q13670 270 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 ODF3L2Q3SX64 289 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 IDNKQ5T6J7 187 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 CEMP1Q6PRD7 247 aaPredicted RBP5.65□□□□□ -1.5
NEK3-201ENST00000550331 LYG2Q86SG7 212 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 TMEM17Q86X19 198 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 TMEM217Q8N7C4 229 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 OR10W1Q8NGF6 305 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 OR1L8Q8NGR8 309 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 LSM10Q969L4 123 aaKnown RBP5.65□□□□□ -1.5
NEK3-201ENST00000550331 YTHDF1Q9BYJ9 559 aaKnown RBP5.65□□□□□ -1.5
NEK3-201ENST00000550331 AUNIPQ9H7T9 357 aa5.65□□□□□ -1.5
NEK3-201ENST00000550331 F11RQ9Y624 299 aaKnown RBP5.65□□□□□ -1.5
NEK3-201ENST00000550331 DNAH6Q9C0G6 4158 aa5.65□□□□□ -1.51
NEK3-201ENST00000550331 TEX50A0A1B0GTY4 177 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 CLEC2LP0C7M8 214 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 F2RP25116 425 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 GNRHRP30968 328 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 DEFB135Q30KP9 77 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 SLC25A24Q6NUK1 477 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 DHRS11Q6UWP2 260 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 STPG3Q8N7X2 389 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 OR5B3Q8NH48 314 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 SCARB1Q8WTV0 552 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 GATAD1Q8WUU5 269 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 MOB3AQ96BX8 217 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 RNF183Q96D59 192 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 TMEM56Q96MV1 263 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 Q9H521 79 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 IFT46Q9NQC8 304 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 NDUFA4L2Q9NRX3 87 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 C21orf62Q9NYP8 219 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 UBQLN2Q9UHD9 624 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 PRNDQ9UKY0 176 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 ANAPC10Q9UM13 185 aa5.64□□□□□ -1.51
NEK3-201ENST00000550331 KLK5Q9Y337 293 aaPredicted RBP5.64□□□□□ -1.51
NEK3-201ENST00000550331 LOC100506127A0A0U1RQW1 187 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 K7EIM0 57 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 XRCC3O43542 346 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 PGLYRP1O75594 196 aaPredicted RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 SNAPC5O75971 98 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 KRASP01116 189 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 RLN1P04808 185 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 FCER2P06734 321 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 MFAP2P55001 183 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 CMC4P56277 68 aaPredicted RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 TAS2R46P59540 309 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 EWSR1Q01844 656 aaKnown RBP eCLIP5.63□□□□□ -1.51
NEK3-201ENST00000550331 RELQ04864 619 aaPredicted RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 CROCCP3Q8IVE0 287 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 CMTM1Q8IZ96 169 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 RPP25LQ8N5L8 163 aaKnown RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 FCAMRQ8WWV6 532 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 DGCR14Q96DF8 476 aaKnown RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 GALNT14Q96FL9 552 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 S100A16Q96FQ6 103 aaKnown RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 TSC22D3Q99576 134 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 CHRDL1Q9BU40 450 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 C20orf24Q9BUV8 137 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 C6orf62Q9GZU0 229 aaPredicted RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 RNF167Q9H6Y7 350 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 MAP6D1Q9H9H5 199 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 FAM212BQ9NTI7 297 aaPredicted RBP5.63□□□□□ -1.51
NEK3-201ENST00000550331 FKBP11Q9NYL4 201 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 EHFQ9NZC4 300 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 SMPXQ9UHP9 88 aa5.63□□□□□ -1.51
NEK3-201ENST00000550331 OR51B2Q9Y5P1 312 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms