RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 SRPXP78539 464 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 TMEM268Q5VZI3 342 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 ACSM6Q6P461 480 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 SLC35G3Q8N808 338 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 IL22RA2Q969J5 263 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 TMEM230Q96A57 120 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 OR4C12Q96R67 309 aa19.92■□□□□ 0.78
CPSF6-205ENST00000550075 KRTAP10-11P60412 298 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 KLF5Q13887 457 aaPredicted RBP19.91■□□□□ 0.78
CPSF6-205ENST00000550075 BAK1Q16611 211 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 IZUMO4Q1ZYL8 232 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 SLC25A24Q6NUK1 477 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 TMED4Q7Z7H5 227 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 MRAPQ8TCY5 172 aa19.91■□□□□ 0.78
CPSF6-205ENST00000550075 CENPXA8MT69 81 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 BMPR1BO00238 502 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 IFNA17P01571 189 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 SYNJ2BPP57105 145 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 RBMS2Q15434 407 aaKnown RBP19.9■□□□□ 0.78
CPSF6-205ENST00000550075 LINC00299Q6ZSB3 139 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 SELENOHQ8IZQ5 122 aaKnown RBP19.9■□□□□ 0.78
CPSF6-205ENST00000550075 TMEM56-RWDD3S4R434 201 aa19.9■□□□□ 0.78
CPSF6-205ENST00000550075 A0A0B4J293 547 aa19.89■□□□□ 0.77
CPSF6-205ENST00000550075 GGCTO75223 188 aaKnown RBP19.89■□□□□ 0.77
CPSF6-205ENST00000550075 ERHP84090 104 aaKnown RBP19.89■□□□□ 0.77
CPSF6-205ENST00000550075 TMEM187Q14656 261 aa19.89■□□□□ 0.77
CPSF6-205ENST00000550075 OR1P1Q8NH06 330 aa19.89■□□□□ 0.77
CPSF6-205ENST00000550075 LHFPL5Q8TAF8 219 aa19.89■□□□□ 0.77
CPSF6-205ENST00000550075 VN1R17PQ8TDU5 208 aa19.89■□□□□ 0.77
CPSF6-205ENST00000550075 C7orf50Q9BRJ6 194 aaKnown RBP19.89■□□□□ 0.77
CPSF6-205ENST00000550075 MFSD2BA6NFX1 497 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 A6NHS1 94 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 ST8SIA3O43173 380 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 IL7P13232 177 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 ARL3P36405 182 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 DCTN2Q13561 401 aaKnown RBP19.88■□□□□ 0.77
CPSF6-205ENST00000550075 TMEM128Q5BJH2 165 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 CLEC19AQ6UXS0 136 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 OR2C3Q8N628 320 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 OR9G4Q8NGQ1 327 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 CCDC140Q96MF4 163 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 ENY2Q9NPA8 101 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 PEMTQ9UBM1 199 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 DMRT1Q9Y5R6 373 aa19.88■□□□□ 0.77
CPSF6-205ENST00000550075 A0A0G2JRQ6 117 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 IGHV3-23P01764 117 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 HOXA1P49639 335 aaPredicted RBP19.87■□□□□ 0.77
CPSF6-205ENST00000550075 LGI3Q8N145 548 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 ZNF114Q8NC26 417 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 SDHCQ99643 169 aaPredicted RBP19.87■□□□□ 0.77
CPSF6-205ENST00000550075 CTNNBIP1Q9NSA3 81 aaPredicted RBP19.87■□□□□ 0.77
CPSF6-205ENST00000550075 CACFD1Q9UGQ2 172 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 S4R3C0 116 aa19.87■□□□□ 0.77
CPSF6-205ENST00000550075 PPP5D1E7EU14 171 aa19.86■□□□□ 0.77
CPSF6-205ENST00000550075 SUPT4H1P63272 117 aaKnown RBP19.86■□□□□ 0.77
CPSF6-205ENST00000550075 CNPY1Q3B7I2 92 aa19.86■□□□□ 0.77
CPSF6-205ENST00000550075 CENPSQ8N2Z9 138 aa19.86■□□□□ 0.77
CPSF6-205ENST00000550075 ZNF502Q8TBZ5 544 aa19.86■□□□□ 0.77
CPSF6-205ENST00000550075 CACNG5Q9UF02 275 aa19.86■□□□□ 0.77
CPSF6-205ENST00000550075 A0A0B4J2A0 478 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 VAMP1P23763 118 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 SNCAP37840 140 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 ATP6V0BQ99437 205 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 BATF3Q9NR55 127 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 SHPKQ9UHJ6 478 aa19.85■□□□□ 0.77
CPSF6-205ENST00000550075 ZNF256Q9Y2P7 627 aaPredicted RBP19.85■□□□□ 0.77
CPSF6-205ENST00000550075 LINC00854A0A1B0GVQ3 168 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 INS-IGF2F8WCM5 200 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 MFAP2P55001 183 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 SPCS3P61009 180 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 AARDQ4LEZ3 155 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 SPINK9Q5DT21 86 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 S100ZQ8WXG8 99 aa19.84■□□□□ 0.77
CPSF6-205ENST00000550075 PRKDCP78527 4128 aaKnown RBP19.83■□□□□ 0.77
CPSF6-205ENST00000550075 WI2-2373I1.2A0A1W2PRP0 233 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 K7EIL1 84 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 LY86O95711 162 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 SULT1A3P0DMM9 295 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 SULT1A4P0DMN0 295 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 GPR183P32249 361 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 CCR6P51684 374 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 UBE2MP61081 183 aaKnown RBP19.83■□□□□ 0.77
CPSF6-205ENST00000550075 OR52E5Q8NH55 327 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 GPR146Q96CH1 333 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 MISP3Q96FF7 219 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 CCDC32Q9BV29 185 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 C21orf62Q9NYP8 219 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 PTTG2Q9NZH5 202 aa19.83■□□□□ 0.77
CPSF6-205ENST00000550075 DUXBA0A1W2PPF3 345 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 NDUFB6O95139 128 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 CLEC3BP05452 202 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 SUB1P53999 127 aaKnown RBP eCLIP19.82■□□□□ 0.76
CPSF6-205ENST00000550075 FAM106AQ4KMX7 169 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 Q6ZRM9 215 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 GAR1Q9NY12 217 aaKnown RBP19.82■□□□□ 0.76
CPSF6-205ENST00000550075 PRR13Q9NZ81 148 aa19.82■□□□□ 0.76
CPSF6-205ENST00000550075 OR2C1O95371 312 aa19.81■□□□□ 0.76
CPSF6-205ENST00000550075 HLA-AP01891 365 aaKnown RBP19.81■□□□□ 0.76
CPSF6-205ENST00000550075 PLET1Q6UQ28 207 aa19.81■□□□□ 0.76
CPSF6-205ENST00000550075 GPHB5Q86YW7 130 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms