RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 CCL5P13501 91 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 PPIBP23284 216 aaKnown RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BOP23527 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 ALDH3A1P30838 453 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BBP33778 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 CA5AP35218 305 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BDP58876 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 RAB4BP61018 213 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H4AP62805 103 aaKnown RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BCP62807 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HBA1P69905 142 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 TNFRSF9Q07011 255 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST2H2BEQ16778 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 IBA57Q5T440 356 aaKnown RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 C3orf33Q6P1S2 294 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 RPL22L1Q6P5R6 122 aaKnown RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 TMPPEQ6ZT21 453 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 SLC7A6Q92536 515 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BHQ93079 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BNQ99877 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HIST1H2BMQ99879 126 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 HOPXQ9BPY8 73 aaPredicted RBP1.43□□□□□ -2.18
CCDC38-208ENST00000549876 TMEM70Q9BUB7 260 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 IL36BQ9NZH7 164 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 ATG2BQ96BY7 2078 aa1.43□□□□□ -2.18
CCDC38-208ENST00000549876 YTHDC2Q9H6S0 1430 aaKnown RBP1.42□□□□□ -2.18
CCDC38-208ENST00000549876 hCG_1818297A0A087WSY0 165 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 TRGV5A0A0B4J1U4 118 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 A0A0J9YW62 118 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 MDFIC2A0A1B0GVS7 189 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 IRGMA1A4Y4 181 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 A8MT66 165 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 IFNA21P01568 189 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 IGKV1-5P01602 117 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 C1QBP02746 253 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 ERP29P30040 261 aaKnown RBP1.42□□□□□ -2.18
CCDC38-208ENST00000549876 SERPINB1P30740 379 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 CRYBA4P53673 196 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GNG3P63215 75 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 S100A12P80511 92 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 RPL18Q07020 188 aaKnown RBP1.42□□□□□ -2.18
CCDC38-208ENST00000549876 AADACL3Q5VUY0 350 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 HCP5Q6MZN7 132 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GOLT1AQ6ZVE7 132 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GRINAQ7Z429 371 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 PHF13Q86YI8 300 aaPredicted RBP1.42□□□□□ -2.18
CCDC38-208ENST00000549876 DYNAPQ8N1N2 210 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 STX19Q8N4C7 294 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 OR4C16Q8NGL9 310 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 OR5C1Q8NGR4 320 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GPR146Q96CH1 333 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 C2orf50Q96LR7 162 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GPER1Q99527 375 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 GINS3Q9BRX5 216 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 DERL1Q9BUN8 251 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 SH3BGRL3Q9H299 93 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 C11orf68Q9H3H3 251 aaKnown RBP1.42□□□□□ -2.18
CCDC38-208ENST00000549876 C8orf4Q9NR00 106 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 BATF3Q9NR55 127 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 SPANXA1Q9NS26 97 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 MINOS1-NBL1R4GNA1 71 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 TONSLQ96HA7 1378 aa1.42□□□□□ -2.18
CCDC38-208ENST00000549876 SIPA1L1O43166 1804 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 DOCK3Q8IZD9 2030 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 IGKV1D-43A0A0B4J1Z2 117 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 A0A0J9YX75 114 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 TRAPPC13A5PLN9 417 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 C11orf86A6NJI1 115 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 FABP5P3A8MUU1 101 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 ODF3BA8MYP8 253 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 AIPO00170 330 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 S1PR2O95136 353 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 CRHP06850 196 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 CTSGP08311 255 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 IDO1P14902 403 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 GZMHP20718 246 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 PSMB8P28062 276 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 G6PCP35575 357 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 PSMD8P48556 350 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 EMP1P54849 157 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 TAS2R41P59536 307 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 DEFA1P59665 94 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 AKR1C8PQ5T2L2 129 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 LHFPL1Q86WI0 220 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 ZNF439Q8NDP4 499 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 RASSF5Q8WWW0 418 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 H1FXQ92522 213 aaKnown RBP1.41□□□□□ -2.18
CCDC38-208ENST00000549876 FGF13Q92913 245 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 MIXL1Q9H2W2 232 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 RNF122Q9H9V4 155 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 LYRM2Q9NU23 88 aaPredicted RBP1.41□□□□□ -2.18
CCDC38-208ENST00000549876 TVP23BQ9NYZ1 205 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 TP73-AS1Q9UF72 201 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 RBM7Q9Y580 266 aaKnown RBP1.41□□□□□ -2.18
CCDC38-208ENST00000549876 ZNF407Q9C0G0 2248 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 KIF24Q5T7B8 1368 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 DENND4BO75064 1496 aaPredicted RBP1.41□□□□□ -2.18
CCDC38-208ENST00000549876 CACNA1SQ13698 1873 aa1.41□□□□□ -2.18
CCDC38-208ENST00000549876 DOCK5Q9H7D0 1870 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms