RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 ZNF114Q8NC26 417 aa13.65□□□□□ -0.22
RAPGEF3-220ENST00000549347 PDCD10Q9BUL8 212 aa13.65□□□□□ -0.22
RAPGEF3-220ENST00000549347 PLEKHA3Q9HB20 300 aa13.65□□□□□ -0.22
RAPGEF3-220ENST00000549347 DMRT1Q9Y5R6 373 aa13.65□□□□□ -0.22
RAPGEF3-220ENST00000549347 F11RQ9Y624 299 aaKnown RBP13.65□□□□□ -0.22
RAPGEF3-220ENST00000549347 IGHV4OR15-8A0A075B7B6 117 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 A0A087WW49 117 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 CYB5BO43169 146 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 HLA-AP01891 365 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 HSPB1P04792 205 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 OR4E1P0C645 316 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 ANXA7P20073 488 aaKnown RBP13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 ATP5G2Q06055 141 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 DHRS2Q13268 280 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 C15orf32Q32M92 178 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 OR2C3Q8N628 320 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 DPF1Q92782 380 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 FBXL7Q9UJT9 491 aa13.64□□□□□ -0.23
RAPGEF3-220ENST00000549347 PKD1L1Q8TDX9 2849 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 LINC01619G3V211 115 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 NDUFB8O95169 186 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 IFNA17P01571 189 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 SULT1A3P0DMM9 295 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 SULT1A4P0DMN0 295 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 RAB25P57735 213 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 FAM209BQ5JX69 171 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 LYG2Q86SG7 212 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 RCC1LQ96I51 464 aaKnown RBP13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 NUDT15Q9NV35 164 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 CACFD1Q9UGQ2 172 aa13.63□□□□□ -0.23
RAPGEF3-220ENST00000549347 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 FAM240BA0A1B0GVZ2 78 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 DUS4LO95620 317 aaKnown RBP13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 MFAP2P55001 183 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 SPCS3P61009 180 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 SMCO1Q147U7 214 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 SPINK9Q5DT21 86 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 SAMD5Q5TGI4 173 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 OR1L6Q8NGR2 347 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 OR1P1Q8NH06 330 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 RANGRFQ9HD47 186 aaPredicted RBP13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 THYN1Q9P016 225 aa13.62□□□□□ -0.23
RAPGEF3-220ENST00000549347 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 SLC25A6P12236 298 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 HOXA1P49639 335 aaPredicted RBP13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 SLURP1P55000 103 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 ERHP84090 104 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 C4orf46Q504U0 113 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 CXorf58Q96LI9 332 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 CCDC140Q96MF4 163 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 TMED3Q9Y3Q3 217 aa13.61□□□□□ -0.23
RAPGEF3-220ENST00000549347 TRAV6A0A075B6T7 132 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 A0A1B0GU03 582 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 ANKRD34BA5PLL1 514 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 MFSD2BA6NFX1 497 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 IGLL1P15814 213 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 ZP3P21754 424 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 SLC25A24Q6NUK1 477 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 COQ8AQ8NI60 647 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 MCRIP2Q9BUT9 160 aaKnown RBP13.6□□□□□ -0.23
RAPGEF3-220ENST00000549347 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 G3V4G9 280 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 PITX3O75364 302 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 HOXD3P31249 432 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 BSXQ3C1V8 233 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 OXLD1Q5BKU9 147 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 ENKURQ8TC29 256 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 VN1R17PQ8TDU5 208 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 MITD1Q8WV92 249 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 DCUN1D4Q92564 292 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 DLX4Q92988 240 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 ENY2Q9NPA8 101 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
RAPGEF3-220ENST00000549347 BMPR1BO00238 502 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 DEFA1P59665 94 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 DEFA3P59666 94 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 TNFRSF9Q07011 255 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 KPRPQ5T749 579 aaPredicted RBP13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 GGNBP1Q5YKI7 109 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 PVRIGQ6DKI7 326 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 OR52B4Q8NGK2 314 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 ZNF502Q8TBZ5 544 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 GPR61Q9BZJ8 451 aa13.58□□□□□ -0.24
RAPGEF3-220ENST00000549347 MGAM2Q2M2H8 2515 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 K7EIM0 57 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 OVOL1O14753 267 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 WIPF1O43516 503 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 NXPH3O95157 252 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 HOXB5P09067 269 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 RNASE2P10153 161 aaKnown RBP13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 SNCAP37840 140 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 BEAN1Q3B7T3 259 aa13.57□□□□□ -0.24
RAPGEF3-220ENST00000549347 DUSP18Q8NEJ0 188 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms