RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 ZNF383Q8NA42 475 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 OR11H6Q8NGC7 330 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 OR5AN1Q8NGI8 311 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 SCGB1C1Q8TD33 95 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 SSMEM1Q8WWF3 244 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 RHOVQ96L33 236 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 HARBI1Q96MB7 349 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 WWC2-AS2Q96NR7 200 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 NABP2Q9BQ15 211 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 MRPL20Q9BYC9 149 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 MAGT1Q9H0U3 335 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM140Q9NV12 185 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 BET1LQ9NYM9 111 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 PFDN2Q9UHV9 154 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 TBL2Q9Y4P3 447 aaKnown RBP5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 SACSQ9NZJ4 4579 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 DNAH9Q9NYC9 4486 aa5.69□□□□□ -1.5
DEPDC4-208ENST00000549341 A0A1W2PN81 502 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 FAM24AA6NFZ4 105 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 C15orf61A6NNL5 157 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 PROP1O75360 226 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 FCN3O75636 299 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 TOX4O94842 621 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 IGLV1-47P01700 117 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 IGHV4-59P01825 116 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 OR8U8P0C7N1 319 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 P0C879 139 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 IAPPP10997 89 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 CHRNA7P36544 502 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 SULT1A1P50225 295 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 HSPE1P61604 102 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 ERHP84090 104 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 PAX8Q06710 450 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 CLLU1Q5K131 121 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 SPANXN5Q5MJ07 72 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 OR4A47Q6IF82 309 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 Q6YL49 198 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 LILRB2Q8N423 598 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 UBAC2Q8NBM4 344 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 OR10P1Q8NGE3 313 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 OR5B3Q8NH48 314 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 DTD1Q8TEA8 209 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 RNF141Q8WVD5 230 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 ST6GALNAC6Q969X2 333 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 PINX1Q96BK5 328 aaKnown RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 GNPNAT1Q96EK6 184 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 COMMD5Q9GZQ3 224 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 RBKSQ9H477 322 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 PLEKHA3Q9HB20 300 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 HEYLQ9NQ87 328 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 KIAA1456Q9P272 454 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 FBXL17Q9UF56 701 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 FOXA2Q9Y261 457 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 ZNF257Q9Y2Q1 563 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 POLR3KQ9Y2Y1 108 aaPredicted RBP5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
DEPDC4-208ENST00000549341 IGHV1-3A0A0C4DH29 117 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 MSGN1A6NI15 193 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 NPIPB6E9PJ23 425 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 UPK2O00526 184 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 KBTBD11O94819 623 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 NXPH3O95157 252 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 IFNA10P01566 189 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 S100A1P23297 94 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 CD1BP29016 333 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 BRS3P32247 399 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 MAS1LP35410 378 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 REG1BP48304 166 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 RAB5CP51148 216 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 SUB1P53999 127 aaKnown RBP eCLIP5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 RAB2AP61019 212 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 AARDQ4LEZ3 155 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 TPTE2P1Q5T6R2 138 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 ALKAL2Q6UX46 152 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 Q6ZRM9 215 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 Q6ZSV7 163 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 VMO1Q7Z5L0 202 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 MMD2Q8IY49 270 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 C11orf42Q8N5U0 333 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 TMEM86BQ8N661 226 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 TEX45Q8NA69 505 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 OR1L8Q8NGR8 309 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 ATP5SQ99766 215 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 QTRT1Q9BXR0 403 aaKnown RBP5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 SMIM3Q9BZL3 60 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 C11orf1Q9H5F2 150 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 SIRT7Q9NRC8 400 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 TCF19Q9Y242 345 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 OR51B2Q9Y5P1 312 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 U3KQE9 123 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 HYDINQ4G0P3 5121 aa5.67□□□□□ -1.5
DEPDC4-208ENST00000549341 IGSF23A1L1A6 192 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 TEX46H3BTG2 121 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SOX15O60248 233 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 CST7O76096 145 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 OR9G9P0C7N8 305 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SEC11BP0C7V7 166 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SAA1P0DJI8 122 aaPredicted RBP5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 SNCAP37840 140 aa5.66□□□□□ -1.5
DEPDC4-208ENST00000549341 DYNLT3P51808 116 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms