RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 SLC16A13Q7RTY0 426 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 OR1P1Q8NH06 330 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 OR4A16Q8NH70 328 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 SCARB1Q8WTV0 552 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 C21orf62Q9NYP8 219 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 CEPT1Q9Y6K0 416 aa14.02□□□□□ -0.17
CHMP1A-207ENST00000549328 OR2T8A6NH00 312 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 K7EIM0 57 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 CD74P04233 296 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 LYL1P12980 280 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 PGAM2P15259 253 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 HSPE1P61604 102 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 MRPS10P82664 201 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 SSBP1Q04837 148 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 RNASE12Q5GAN4 147 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 DEFB125Q8N687 156 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 TMEM229BQ8NBD8 167 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 TERB2Q8NHR7 220 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 TMEM190Q8WZ59 177 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 MRGPRFQ96AM1 343 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 MIXL1Q9H2W2 232 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 GAR1Q9NY12 217 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-207ENST00000549328 IGHV3-35A0A0C4DH35 117 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 GABARAPH6UMI1 98 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 NDUFA4O00483 81 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 PIGPP57054 158 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 TAS2R19P59542 299 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 PRCDQ00LT1 54 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 BTNL8Q6UX41 500 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 OR2C3Q8N628 320 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 ZFAND1Q8TCF1 268 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 ISOC1Q96CN7 298 aa14□□□□□ -0.17
CHMP1A-207ENST00000549328 F8W735 103 aaPredicted RBP13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 RGS5O15539 181 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 PI3P19957 117 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 SPCS2Q15005 226 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 ZNF114Q8NC26 417 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 OR52B4Q8NGK2 314 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 CHRDL1Q9BU40 450 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 HIPK2Q9H2X6 1198 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 C5orf66Q9H5L9 145 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 SRD5A3Q9H8P0 318 aa13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 DAZ1Q9NQZ3 744 aaKnown RBP13.99□□□□□ -0.17
CHMP1A-207ENST00000549328 IGHV3-21A0A0B4J1V1 117 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 C3orf85A0A1B0GTC6 90 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RBMY1BA6NDE4 496 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RBMY1EA6NEQ0 496 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 K7EMT4 169 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 CTDSP2O14595 271 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 ATG12O94817 140 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RAB3DO95716 219 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RBMY1DP0C7P1 496 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 FCGR2BP31994 310 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 STEAP1BQ6NZ63 245 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RBPMS2Q6ZRY4 209 aaKnown RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 OR4D10Q8NGI6 311 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RAB2BQ8WUD1 216 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 TP53RKQ96S44 253 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 TXN2Q99757 166 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 BCL7BQ9BQE9 202 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RABL2AQ9UBK7 228 aaPredicted RBP13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 RABL2BQ9UNT1 228 aa13.98□□□□□ -0.17
CHMP1A-207ENST00000549328 B3GALNT1O75752 331 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 SCAF4O95104 1147 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 CTSGP08311 255 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 ADMP35318 185 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 TMBIM6P55061 237 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 ERHP84090 104 aaKnown RBP13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 Q56UQ5 140 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 CLVS1Q8IUQ0 354 aaPredicted RBP13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 CCDC71LQ8N9Z2 235 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 WFDC10AQ9H1F0 79 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 COPZ2Q9P299 210 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 SELENOKQ9Y6D0 94 aa13.97□□□□□ -0.17
CHMP1A-207ENST00000549328 INS-IGF2F8WCM5 200 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 I3L2K1 104 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 IGKV1-5P01602 117 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 P0C879 139 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 PPP5CP53041 499 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 MFAP4P55083 255 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 MEF2DQ14814 521 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 UBAC2Q8NBM4 344 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 SMIM4Q8WVI0 70 aa13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 SPAG8Q99932 426 aaPredicted RBP13.96□□□□□ -0.17
CHMP1A-207ENST00000549328 C15orf62A8K5M9 175 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 TSPAN4O14817 238 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 CTDSPLO15194 276 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 NUPL2O15504 423 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 CTSDP07339 412 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 UCP1P25874 307 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 AKR1C2P52895 323 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 RELQ04864 619 aaPredicted RBP13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 SCGB2B2Q4G0G5 96 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 LAMTOR1Q6IAA8 161 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 DYNC2LI1Q8TCX1 351 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 MISP3Q96FF7 219 aa13.95□□□□□ -0.18
CHMP1A-207ENST00000549328 CCDC59Q9P031 241 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms