RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 TTC9CQ8N5M4 171 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 OR2C3Q8N628 320 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 P2RX4Q99571 388 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 WNT10AQ9GZT5 417 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 OR5AC2Q9NZP5 309 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 PSMB11A5LHX3 300 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 FBXO24O75426 580 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 PAX9P55771 341 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 CYCSP99999 105 aaKnown RBP13.41□□□□□ -0.26
KRT4-201ENST00000548097 SRSF4Q08170 494 aaKnown RBP13.41□□□□□ -0.26
KRT4-201ENST00000548097 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 KLK15Q9H2R5 256 aa13.41□□□□□ -0.26
KRT4-201ENST00000548097 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
KRT4-201ENST00000548097 CLPSL1A2RUU4 121 aa13.4□□□□□ -0.26
KRT4-201ENST00000548097 DEFA4P12838 97 aa13.4□□□□□ -0.26
KRT4-201ENST00000548097 ERHP84090 104 aaKnown RBP13.4□□□□□ -0.26
KRT4-201ENST00000548097 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
KRT4-201ENST00000548097 HIPK2Q9H2X6 1198 aa13.4□□□□□ -0.26
KRT4-201ENST00000548097 TRAV14DV4A0A0A6YYC5 116 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 IGHV3-21A0A0B4J1V1 117 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 MED6O75586 246 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 MPC2O95563 127 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 IFNA10P01566 189 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 GIPP09681 153 aaPredicted RBP13.39□□□□□ -0.27
KRT4-201ENST00000548097 RNASE2P10153 161 aaKnown RBP13.39□□□□□ -0.27
KRT4-201ENST00000548097 SNCAP37840 140 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 SPANXN5Q5MJ07 72 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 C19orf24Q9BVV8 132 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 S4R3C0 116 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 NPIPB5A8MRT5 1133 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 CRYGCP07315 174 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 PF4V1P10720 104 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 PROK1P58294 105 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 KRTAP10-3P60369 221 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 SLC24A4Q8NFF2 622 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 OR5AU1Q8NGC0 362 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 OR2T35Q8NGX2 323 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 OR4C12Q96R67 309 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 RNF126Q9BV68 326 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
KRT4-201ENST00000548097 G3V3Q6 166 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 DEDDO75618 318 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 CCNKO75909 580 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 OR2J3O76001 311 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 IGHV3-48P01763 117 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 SLC25A24Q6NUK1 477 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 ST6GAL2Q96JF0 529 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 FANCD2OSQ96PS1 177 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
KRT4-201ENST00000548097 C11orf1Q9H5F2 150 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 MBD2Q9UBB5 411 aa13.38□□□□□ -0.27
KRT4-201ENST00000548097 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
KRT4-201ENST00000548097 INS-IGF2F8WCM5 200 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 L7N2F9 121 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 IGLV1-40P01703 118 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 VAMP2P63027 116 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 SLC35B1P78383 322 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 TCTEX1D4Q5JR98 221 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 PINX1Q96BK5 328 aaKnown RBP13.37□□□□□ -0.27
KRT4-201ENST00000548097 MISP3Q96FF7 219 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 TMEM68Q96MH6 324 aa13.37□□□□□ -0.27
KRT4-201ENST00000548097 FAM24AA6NFZ4 105 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 C15orf62A8K5M9 175 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 IGHG4P01861 327 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 RPLP1P05386 114 aaKnown RBP13.36□□□□□ -0.27
KRT4-201ENST00000548097 CD28P10747 220 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 NPY1RP25929 384 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 RAP2BP61225 183 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 MLANAQ16655 118 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 BSXQ3C1V8 233 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 AWAT1Q58HT5 328 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 HSD17B13Q7Z5P4 300 aaPredicted RBP13.36□□□□□ -0.27
KRT4-201ENST00000548097 GON7Q9BXV9 100 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 CACFD1Q9UGQ2 172 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 ZNF580Q9UK33 172 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 TMEM89A2RUT3 159 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 IGHV3-23P01764 117 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 TRGV3P03979 118 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 PSMB8P28062 276 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 HTR2BP41595 481 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 CAV2P51636 162 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 TPPP2P59282 170 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 FOXL1Q12952 345 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 TEX38Q6PEX7 206 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 WIPF2Q8TF74 440 aaPredicted RBP13.36□□□□□ -0.27
KRT4-201ENST00000548097 SMIM8Q96KF7 97 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 RAB40CQ96S21 281 aa13.36□□□□□ -0.27
KRT4-201ENST00000548097 IGLV11-55A0A075B6I3 123 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 NDUFB8O95169 186 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 RLN2P04090 185 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 RAB9AP51151 201 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 RHOGP84095 191 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 AKAP14Q86UN6 197 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 MRPL41Q8IXM3 137 aaKnown RBP13.35□□□□□ -0.27
KRT4-201ENST00000548097 ZNF114Q8NC26 417 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 OR1P1Q8NH06 330 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 CIB3Q96Q77 187 aaPredicted RBP13.35□□□□□ -0.27
KRT4-201ENST00000548097 U3KQ87 197 aa13.35□□□□□ -0.27
KRT4-201ENST00000548097 TENM1Q9UKZ4 2725 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms