RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 IGHV4-30-2A0A087WSY4 118 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 A0A1W2PPV4 95 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 TMEM218A2RU14 115 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 PLA2G2AP14555 144 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 RPL29P47914 159 aaKnown RBP10.78□□□□□ -0.68
PTCH1-215ENST00000547672 CD69Q07108 199 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 TUSC1Q2TAM9 212 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 PRSS57Q6UWY2 283 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 TREML4Q6UXN2 200 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 LHFPL4Q7Z7J7 247 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 LINC01356Q8N9X3 169 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 BPIFCQ8NFQ6 507 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 OR10G4Q8NGN3 311 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 OR10G9Q8NGN4 311 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 OR10G7Q8NGN6 311 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 MBD6Q96DN6 1003 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 RPRMQ9NS64 109 aa10.78□□□□□ -0.68
PTCH1-215ENST00000547672 SMG1Q96Q15 3661 aaKnown RBP10.77□□□□□ -0.68
PTCH1-215ENST00000547672 IGHV1-69DA0A0B4J2H0 117 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 CTXND1A0A1B0GTU2 59 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 NDUFS6O75380 124 aaKnown RBP10.77□□□□□ -0.69
PTCH1-215ENST00000547672 MT-CO2P00403 227 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 IGHV1-69P01742 117 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 CD5P06127 495 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 TMEM11P17152 192 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 DLX1P56177 255 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 SELENOTP62341 195 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 GUK1Q16774 197 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 C5orf64Q2M2E5 130 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 TMEM249Q2WGJ8 235 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 OR10W1Q8NGF6 305 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 NANPQ8TBE9 248 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 RITA1Q96K30 269 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 FBXL15Q9H469 300 aa10.77□□□□□ -0.69
PTCH1-215ENST00000547672 UBR5O95071 2799 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-215ENST00000547672 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 A0A1W2PRD5 423 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 A0A1W2PRF3 423 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 A0A1W2PRM7 423 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 RBFOX3A6NFN3 312 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 FABP1P07148 127 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 SAA4P35542 130 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 GNB1P62873 340 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 LOXL1Q08397 574 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-215ENST00000547672 DEFB113Q30KQ7 82 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 PVRIGQ6DKI7 326 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 TMEM170AQ8WVE7 144 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 SRSF12Q8WXF0 261 aaKnown RBP10.76□□□□□ -0.69
PTCH1-215ENST00000547672 RNF2Q99496 336 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 SEC11CQ9BY50 192 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 FAM96BQ9Y3D0 163 aa10.76□□□□□ -0.69
PTCH1-215ENST00000547672 LSM4Q9Y4Z0 139 aaKnown RBP10.76□□□□□ -0.69
PTCH1-215ENST00000547672 TET2Q6N021 2002 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-215ENST00000547672 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 NCBP2LA6PVI3 153 aaKnown RBP10.75□□□□□ -0.69
PTCH1-215ENST00000547672 F8W036 122 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 AGPAT2O15120 278 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 MYOD1P15172 320 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 FHITP49789 147 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 ELLP55199 621 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-215ENST00000547672 PRB3Q04118 309 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-215ENST00000547672 WT1-ASQ06250 92 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 HNF4GQ14541 408 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 FXYD3Q14802 87 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 KHDC3LQ587J8 217 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 SLC16A13Q7RTY0 426 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 SVBPQ8N300 66 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 Q8N6K4 173 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 SUN5Q8TC36 379 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 ABHD5Q8WTS1 349 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 RCC1LQ96I51 464 aaKnown RBP10.75□□□□□ -0.69
PTCH1-215ENST00000547672 TMEM68Q96MH6 324 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 P2RX4Q99571 388 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 RASL11BQ9BPW5 248 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 MEGF9Q9H1U4 602 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 C7orf69Q9H7B7 122 aa10.75□□□□□ -0.69
PTCH1-215ENST00000547672 MAP1LC3B2A6NCE7 125 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 SEC14L6B5MCN3 397 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 SCGB2A1O75556 95 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 DEFA4P12838 97 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 RHOBP62745 196 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 GAMTQ14353 236 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 MRGPRG-AS1Q2M3A8 158 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 ARSJQ5FYB0 599 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-215ENST00000547672 LDLRAD2Q5SZI1 272 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 TEX29Q8N6K0 151 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 GGTLC1Q9BX51 225 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 MAP1LC3BQ9GZQ8 125 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 SLC35B3Q9H1N7 401 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 THYN1Q9P016 225 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 F11RQ9Y624 299 aaKnown RBP10.74□□□□□ -0.69
PTCH1-215ENST00000547672 PXMP4Q9Y6I8 212 aa10.74□□□□□ -0.69
PTCH1-215ENST00000547672 SPTAN1Q13813 2472 aaKnown RBP10.74□□□□□ -0.69
PTCH1-215ENST00000547672 USP9XQ93008 2570 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-215ENST00000547672 FLNCQ14315 2725 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 CGB1A6NKQ9 187 aa10.73□□□□□ -0.69
PTCH1-215ENST00000547672 HSPB1P04792 205 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms