RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LINC00313P59037 77 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 BTN3A2P78410 334 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 HOXC5Q00444 222 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 PSG4Q00888 419 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF816Q0VGE8 651 aaPredicted RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 PLPPR5Q32ZL2 321 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 ARHGAP11BQ3KRB8 267 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 PYCR3Q53H96 274 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 UNQ9165/PRO28630Q6UXU0 137 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 LRP11Q86VZ4 500 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 BAP18Q8IXM2 172 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 SAXO1Q8IYX7 474 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF615Q8N8J6 731 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 SFRP2Q96HF1 295 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 KLF6Q99612 283 aaPredicted RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 TRABDQ9H4I3 376 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 NYAP2Q9P242 653 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF230Q9UIE0 474 aaPredicted RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 HHLA2Q9UM44 414 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 CARHSP1Q9Y2V2 147 aaKnown RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 CDK5RAP2Q96SN8 1893 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 DOPEY2Q9Y3R5 2298 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 NAV3Q8IVL0 2385 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 SETD2Q9BYW2 2564 aaPredicted RBP2.68□□□□□ -1.98
SCAF11-210ENST00000547654 LRP4O75096 1905 aa2.68□□□□□ -1.98
SCAF11-210ENST00000547654 ATMQ13315 3056 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 IBTKQ9P2D0 1353 aaPredicted RBP2.67□□□□□ -1.98
SCAF11-210ENST00000547654 IGLV3-16A0A075B6K0 115 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 IGHV1-69-2A0A0G2JMI3 117 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 A6NED7 52 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 GOLGA6L4A6NEF3 574 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 KNCNA6PVL3 124 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 KLRC4O43908 158 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 APOMO95445 188 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 SERPINA7P05543 415 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 ATP6V0CP27449 155 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 CAV1Q03135 178 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 BSPH1Q075Z2 132 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 FUT5Q11128 374 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LPCAT3Q6P1A2 487 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 ALKAL1Q6UXT8 129 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LYG2Q86SG7 212 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 SGPP2Q8IWX5 399 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 OR2D3Q8NGH3 330 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 OR2T4Q8NH00 348 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LHFPL5Q8TAF8 219 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 CPNE2Q96FN4 548 aaPredicted RBP2.67□□□□□ -1.98
SCAF11-210ENST00000547654 CNBD2Q96M20 576 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LINC00167Q96N53 147 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 TBX5Q99593 518 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LINC00574Q9H8X3 128 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 CXorf21Q9HAI6 301 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 ARMC1Q9NVT9 282 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 MRPL27Q9P0M9 148 aaKnown RBP2.67□□□□□ -1.98
SCAF11-210ENST00000547654 ANAPC10Q9UM13 185 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 ANGPT4Q9Y264 503 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 PHLDA3Q9Y5J5 127 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 LRBAP50851 2863 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 MIA3Q5JRA6 1907 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 MGAQ8IWI9 3026 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 CELSR1Q9NYQ6 3014 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 SPENQ96T58 3664 aaKnown RBP2.67□□□□□ -1.98
SCAF11-210ENST00000547654 NLRC5Q86WI3 1866 aa2.67□□□□□ -1.98
SCAF11-210ENST00000547654 TSC2P49815 1807 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OR6C6A6NF89 314 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OR5K4A6NMS3 321 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF729A6NN14 1252 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 CIAO1O76071 339 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 CD7P09564 240 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 ESDP10768 282 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 KCNE1P15382 129 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 CCL1P22362 96 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 HIST1H1TP22492 207 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OPRM1P35372 400 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 TAS2R45P59539 299 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 IAH1Q2TAA2 248 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 TEX36Q5VZQ5 186 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 C1orf174Q8IYL3 243 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 SLC35F6Q8N357 371 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 ANKRD29Q8N6D5 301 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF676Q8N7Q3 588 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OR11G2Q8NGC1 345 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OR51A2Q8NGJ7 313 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 GNPNAT1Q96EK6 184 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 B9D2Q9BPU9 175 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 HOPXQ9BPY8 73 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 C1QTNF6Q9BXI9 259 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 NKX6-2Q9C056 277 aaPredicted RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 OR2D2Q9H210 308 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 GPR84Q9NQS5 396 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 ZNF586Q9NXT0 402 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 RPUSD1Q9UJJ7 312 aaKnown RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 VPREB3Q9UKI3 123 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 MRPS16Q9Y3D3 137 aaKnown RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 SHROOM3Q8TF72 1996 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 TANC1Q9C0D5 1861 aa2.66□□□□□ -1.98
SCAF11-210ENST00000547654 TLN1Q9Y490 2541 aaKnown RBP2.66□□□□□ -1.98
SCAF11-210ENST00000547654 CREBBPQ92793 2442 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms