RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 PRH1P02810 166 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 OR4E1P0C645 316 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 SLC25A6P12236 298 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 CD33P20138 364 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 VAMP1P23763 118 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 SPCS3P61009 180 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 IFITM3Q01628 133 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 DEFB136Q30KP8 78 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 C15orf32Q32M92 178 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 ANKRD55Q3KP44 614 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 LYZL2Q7Z4W2 148 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 OR1P1Q8NH06 330 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 DPF1Q92782 380 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 PDCD10Q9BUL8 212 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 MCRIP2Q9BUT9 160 aaKnown RBP11.17□□□□□ -0.62
DDX54-203ENST00000546869 HINT2Q9BX68 163 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 PEF1Q9UBV8 284 aaKnown RBP11.17□□□□□ -0.62
DDX54-203ENST00000546869 FBXL7Q9UJT9 491 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 TMED3Q9Y3Q3 217 aa11.17□□□□□ -0.62
DDX54-203ENST00000546869 FBN3Q75N90 2809 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
DDX54-203ENST00000546869 OR2J3O76001 311 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 IFNA17P01571 189 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 REG1AP05451 166 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 SULT1A3P0DMM9 295 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 SULT1A4P0DMN0 295 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 ERHP84090 104 aaKnown RBP11.16□□□□□ -0.62
DDX54-203ENST00000546869 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 LYG2Q86SG7 212 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 VN1R17PQ8TDU5 208 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 CXorf58Q96LI9 332 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 ATP6V0BQ99437 205 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 C20orf85Q9H1P6 137 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 PLEKHA3Q9HB20 300 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 CACNG5Q9UF02 275 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
DDX54-203ENST00000546869 IGHV4OR15-8A0A075B7B6 117 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 A0A087WW49 117 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 TRBV7-1A0A0A6YYK4 115 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 FAM240BA0A1B0GVZ2 78 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 NDUFB8O95169 186 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 HLA-AP01891 365 aaKnown RBP11.15□□□□□ -0.62
DDX54-203ENST00000546869 ZP3P21754 424 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 DHRS2Q13268 280 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 SAMD5Q5TGI4 173 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 C19orf35Q6ZS72 473 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 GPR61Q9BZJ8 451 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 PRR13Q9NZ81 148 aa11.15□□□□□ -0.62
DDX54-203ENST00000546869 WIPF1O43516 503 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 PITX3O75364 302 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 ANXA7P20073 488 aaKnown RBP11.14□□□□□ -0.63
DDX54-203ENST00000546869 MFAP2P55001 183 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 EXOSC2Q13868 293 aaKnown RBP11.14□□□□□ -0.63
DDX54-203ENST00000546869 KPRPQ5T749 579 aaPredicted RBP11.14□□□□□ -0.63
DDX54-203ENST00000546869 SLC25A24Q6NUK1 477 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 COQ8AQ8NI60 647 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 EEF1AKMT3Q96AZ1 226 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 HSPB7Q9UBY9 170 aa11.14□□□□□ -0.63
DDX54-203ENST00000546869 SNCAP37840 140 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 SUB1P53999 127 aaKnown RBP eCLIP11.13□□□□□ -0.63
DDX54-203ENST00000546869 DEFA1P59665 94 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 DEFA3P59666 94 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
DDX54-203ENST00000546869 BSXQ3C1V8 233 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 C4orf46Q504U0 113 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 MITD1Q8WV92 249 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 ENY2Q9NPA8 101 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 NUDT15Q9NV35 164 aa11.13□□□□□ -0.63
DDX54-203ENST00000546869 FAM90A26D6RGX4 464 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 H2AFB2P0C5Z0 115 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 IGLL1P15814 213 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 HOXD3P31249 432 aaPredicted RBP11.12□□□□□ -0.63
DDX54-203ENST00000546869 FCGR2BP31994 310 aaPredicted RBP11.12□□□□□ -0.63
DDX54-203ENST00000546869 INSL3P51460 131 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 DEFA5Q01523 94 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 TNFRSF9Q07011 255 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 DCUN1D4Q92564 292 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 DLX4Q92988 240 aaPredicted RBP11.12□□□□□ -0.63
DDX54-203ENST00000546869 CCDC140Q96MF4 163 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 NBEAL1Q6ZS30 2694 aa11.12□□□□□ -0.63
DDX54-203ENST00000546869 ANKRD34BA5PLL1 514 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 K7EIM0 57 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 BMPR1BO00238 502 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 OVOL1O14753 267 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 IL5P05113 134 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
DDX54-203ENST00000546869 HTR2BP41595 481 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 HOXA1P49639 335 aaPredicted RBP11.11□□□□□ -0.63
DDX54-203ENST00000546869 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
DDX54-203ENST00000546869 OXLD1Q5BKU9 147 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 GGNBP1Q5YKI7 109 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
DDX54-203ENST00000546869 SCARB1Q8WTV0 552 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms