RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 ABCA7Q8IZY2 2146 aa10.24□□□□□ -0.77
NPC1L1-204ENST00000546276 LTBRP36941 435 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 HGFACQ04756 655 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 FAM90A1Q86YD7 464 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 LURAP1LQ8IV03 231 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 GPR6P46095 362 aaPredicted RBP10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 ZNF502Q8TBZ5 544 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 GNB1LQ9BYB4 327 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 C15orf61A6NNL5 157 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 TM4SF5O14894 197 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 YPEL1O60688 119 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 ZNF324O75467 553 aaPredicted RBP10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 ANOS1P23352 680 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 C2orf83Q53S99 150 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 C1orf162Q8NEQ5 155 aaPredicted RBP10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 YPEL2Q96QA6 119 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 DMRTA2Q96SC8 542 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 IGKV3-7A0A075B6H7 116 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 FOXL1Q12952 345 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 MED12Q93074 2177 aa10.23□□□□□ -0.77
NPC1L1-204ENST00000546276 HIGD1CA8MV81 97 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 IGHV1-2P23083 117 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM42Q69YG0 159 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 RBPMS2Q6ZRY4 209 aaKnown RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 C17orf82Q86X59 251 aaPredicted RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 BEND2Q8NDZ0 799 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 OR52E5Q8NH55 327 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 ZNF414Q96IQ9 312 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 AGMATQ9BSE5 352 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 DEPPQ9NTK1 212 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 MPDZO75970 2070 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 HIST1H4GQ99525 98 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 A0A1B0GUT8 65 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 TNFSF13O75888 250 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 IGKV1-5P01602 117 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 OR9G9P0C7N8 305 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 TIMP3P35625 211 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 EFNB3Q15768 340 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM136Q6ZRR5 245 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 RNASEH2CQ8TDP1 164 aaKnown RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 FMC1Q96HJ9 113 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 IGHV2OR16-5A0A0B4J2B6 119 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 FAM90A9PA6NNJ1 464 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 M0R3E3 92 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 APOHP02749 345 aaPredicted RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 NUTF2P61970 127 aaKnown RBP10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 OR10J3Q5JRS4 329 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 C10orf91Q5T1B1 145 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 C1orf194Q5T5A4 169 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 LINC01551Q86U37 167 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 NIT1Q86X76 327 aa10.22□□□□□ -0.77
NPC1L1-204ENST00000546276 A0A1W2PRE2 83 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 ACSF3Q4G176 576 aaPredicted RBP10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 TMEM14EPQ6UXP3 125 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 GPR82Q96P67 336 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 UPK2O00526 184 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 MORN2Q502X0 79 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 ACTL10Q5JWF8 245 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 FAM201AQ5SY85 155 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 ERASQ7Z444 233 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 CLDN16Q9Y5I7 305 aa10.21□□□□□ -0.77
NPC1L1-204ENST00000546276 TRAV9-2A0A087WT02 112 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 C7orf71A4D174 169 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 DUTP33316 252 aaKnown RBP10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 RELQ04864 619 aaPredicted RBP10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 TIMM23BQ5SRD1 257 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 SAPCD1Q5SSQ6 148 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 MBNL2Q5VZF2 373 aaKnown RBP10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 FAM216BQ8N7L0 139 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 LOXL4Q96JB6 756 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 ZNF581Q9P0T4 197 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 RABAC1Q9UI14 185 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 NLRC5Q86WI3 1866 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 SNCGO76070 127 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 IL4P05112 153 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 STAG3L3P0CL85 134 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 OR1N2Q8NGR9 330 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 SMIM12Q96EX1 92 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 CLEC7AQ9BXN2 247 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 ANAPC10Q9UM13 185 aa10.21□□□□□ -0.78
NPC1L1-204ENST00000546276 SPTA1P02549 2419 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 SAA2-SAA4A0A096LPE2 208 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 FAM90A2PQ658T7 463 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 TREML4Q6UXN2 200 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 WDR82Q6UXN9 313 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 PRELID3AQ96N28 172 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 C2orf88Q9BSF0 95 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 ALKBH7Q9BT30 221 aaPredicted RBP10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 IGKV3D-15A0A087WSY6 115 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 GGNQ86UU5 652 aa10.2□□□□□ -0.78
NPC1L1-204ENST00000546276 PPIAL4CA0A0B4J2A2 164 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms