RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 IGLC7A0M8Q6 106 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 E7EUB6 86 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 ST8SIA3O43173 380 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 SCGB2A1O75556 95 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 PPP1R1AQ13522 171 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 KIAA0141Q14154 515 aaPredicted RBP13.56□□□□□ -0.24
CD9-211ENST00000546073 SMCO1Q147U7 214 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 RPEL1Q2QD12 228 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 LINC00482Q8N8I6 264 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 OR52E5Q8NH55 327 aa13.56□□□□□ -0.24
CD9-211ENST00000546073 HEYLQ9NQ87 328 aaPredicted RBP13.56□□□□□ -0.24
CD9-211ENST00000546073 GAR1Q9NY12 217 aaKnown RBP13.56□□□□□ -0.24
CD9-211ENST00000546073 F11RQ9Y624 299 aaKnown RBP13.56□□□□□ -0.24
CD9-211ENST00000546073 A0A0B4J293 547 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 A0A1B0GU03 582 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 CORTO00230 105 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 TCRBP04435 133 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 OR4E1P0C645 316 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 ZNF343Q6P1L6 599 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 OR1P1Q8NH06 330 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 GPR146Q96CH1 333 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 C20orf85Q9H1P6 137 aa13.55□□□□□ -0.24
CD9-211ENST00000546073 C9orf170A2RU37 121 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 OVOL1O14753 267 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 PLA2G10O15496 165 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 SUPT4H1P63272 117 aaKnown RBP13.54□□□□□ -0.24
CD9-211ENST00000546073 WT1-ASQ06250 92 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 ASAH1Q13510 395 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 DCTN2Q13561 401 aaKnown RBP13.54□□□□□ -0.24
CD9-211ENST00000546073 IZUMO4Q1ZYL8 232 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 C9orf66Q5T8R8 295 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 LYZL2Q7Z4W2 148 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 LYG2Q86SG7 212 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 MISP3Q96FF7 219 aa13.54□□□□□ -0.24
CD9-211ENST00000546073 ALX4Q9H161 411 aaPredicted RBP13.54□□□□□ -0.24
CD9-211ENST00000546073 IGHV4OR15-8A0A075B7B6 117 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 A0A087WW49 117 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 MED6O75586 246 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 H2AFB2P0C5Z0 115 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 INSL3P51460 131 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 ETV3LQ6ZN32 361 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 OR2C3Q8N628 320 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 LRTM2Q8N967 370 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 LHFPL5Q8TAF8 219 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 VN1R17PQ8TDU5 208 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 OR4C12Q96R67 309 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 GPN1Q9HCN4 374 aaPredicted RBP13.53□□□□□ -0.24
CD9-211ENST00000546073 FLVCR2Q9UPI3 526 aa13.53□□□□□ -0.24
CD9-211ENST00000546073 IGLV11-55A0A075B6I3 123 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 TRAV6A0A075B6T7 132 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 A0A1B0GW64 132 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 CGB1A6NKQ9 187 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 SEC14L6B5MCN3 397 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 GGCTO75223 188 aaKnown RBP13.52□□□□□ -0.25
CD9-211ENST00000546073 NDUFB8O95169 186 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 HOXB5P09067 269 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 P0C879 139 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 IGLL1P15814 213 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
CD9-211ENST00000546073 HTR2BP41595 481 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 RPP30P78346 268 aaKnown RBP13.52□□□□□ -0.25
CD9-211ENST00000546073 FHL3Q13643 280 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 FAM106AQ4KMX7 169 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 SPINK9Q5DT21 86 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 NUDT15Q9NV35 164 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 PRR13Q9NZ81 148 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 PEMTQ9UBM1 199 aa13.52□□□□□ -0.25
CD9-211ENST00000546073 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.51□□□□□ -0.25
CD9-211ENST00000546073 RPS10-NUDT3A0A1W2PQS6 291 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 DBX1A6NMT0 343 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 WRBO00258 174 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 LY86O95711 162 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 SLC25A6P12236 298 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 HOXD3P31249 432 aaPredicted RBP13.51□□□□□ -0.25
CD9-211ENST00000546073 ARL3P36405 182 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 DHRS2Q13268 280 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 Q56UQ5 140 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 CLEC19AQ6UXS0 136 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 DCUN1D4Q92564 292 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 PINX1Q96BK5 328 aaKnown RBP13.51□□□□□ -0.25
CD9-211ENST00000546073 FANCD2OSQ96PS1 177 aa13.51□□□□□ -0.25
CD9-211ENST00000546073 A0A0G2JRQ6 117 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 INS-IGF2F8WCM5 200 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 BTCP35070 178 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 SLURP1P55000 103 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 DEFA5Q01523 94 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 UBAC2Q8NBM4 344 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 UXS1Q8NBZ7 420 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 ZNF114Q8NC26 417 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 ATP6V0BQ99437 205 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 C21orf62Q9NYP8 219 aa13.5□□□□□ -0.25
CD9-211ENST00000546073 DNHD1Q96M86 4753 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 ANK2Q01484 3957 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 FAM90A26D6RGX4 464 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 SAP30O75446 220 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 IFNA10P01566 189 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 CLEC3BP05452 202 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 MFAP4P55083 255 aa13.49□□□□□ -0.25
CD9-211ENST00000546073 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms