RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM223AQ8IWN6 122 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 NECAP1Q8NC96 275 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 OR52B4Q8NGK2 314 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 OR52E5Q8NH55 327 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 COQ8AQ8NI60 647 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 PDCD10Q9BUL8 212 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 NOTCH3Q9UM47 2321 aa15.86■□□□□ 0.13
HMGA2-211ENST00000545998 IGLV11-55A0A075B6I3 123 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 C13orf42A0A1B0GVH6 325 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 LGALS1P09382 135 aaKnown RBP15.85■□□□□ 0.13
HMGA2-211ENST00000545998 DEFA4P12838 97 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 SMCO1Q147U7 214 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 PDLIM3Q53GG5 364 aaPredicted RBP15.85■□□□□ 0.13
HMGA2-211ENST00000545998 DUX3Q96PT4 197 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 PLEKHA3Q9HB20 300 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 TMED3Q9Y3Q3 217 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 DMRT1Q9Y5R6 373 aa15.85■□□□□ 0.13
HMGA2-211ENST00000545998 A0A1B0GU03 582 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 INS-IGF2F8WCM5 200 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 CCL24O00175 119 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 OR2J3O76001 311 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 HIST1H1BP16401 226 aaKnown RBP15.84■□□□□ 0.13
HMGA2-211ENST00000545998 SPCS3P61009 180 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 MRPL41Q8IXM3 137 aaKnown RBP15.84■□□□□ 0.13
HMGA2-211ENST00000545998 OR2C3Q8N628 320 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 MITD1Q8WV92 249 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 P2RX4Q99571 388 aa15.84■□□□□ 0.13
HMGA2-211ENST00000545998 F11RQ9Y624 299 aaKnown RBP15.84■□□□□ 0.13
HMGA2-211ENST00000545998 PF4P02776 101 aa15.83■□□□□ 0.13
HMGA2-211ENST00000545998 HOXB5P09067 269 aa15.83■□□□□ 0.13
HMGA2-211ENST00000545998 MYCNOSP40205 109 aa15.83■□□□□ 0.13
HMGA2-211ENST00000545998 SEC22CQ9BRL7 303 aa15.83■□□□□ 0.13
HMGA2-211ENST00000545998 FBXL7Q9UJT9 491 aa15.83■□□□□ 0.13
HMGA2-211ENST00000545998 NDUFB8O95169 186 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 SLC25A6P12236 298 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 MFAP2P55001 183 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 ATP5G2Q06055 141 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 FHL3Q13643 280 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 C15orf32Q32M92 178 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 GGNBP1Q5YKI7 109 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 ZNF343Q6P1L6 599 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 OR11H1Q8NG94 326 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 CACFD1Q9UGQ2 172 aa15.83■□□□□ 0.12
HMGA2-211ENST00000545998 PITX3O75364 302 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 ADAP1O75689 374 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 ERHP84090 104 aaKnown RBP15.82■□□□□ 0.12
HMGA2-211ENST00000545998 PLET1Q6UQ28 207 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 ZNF114Q8NC26 417 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 OR1P1Q8NH06 330 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 ZNF431Q8TF32 576 aaPredicted RBP15.82■□□□□ 0.12
HMGA2-211ENST00000545998 HSPB7Q9UBY9 170 aa15.82■□□□□ 0.12
HMGA2-211ENST00000545998 NOTCH1P46531 2555 aa15.81■□□□□ 0.12
HMGA2-211ENST00000545998 HOXA1P49639 335 aaPredicted RBP15.81■□□□□ 0.12
HMGA2-211ENST00000545998 LINC00482Q8N8I6 264 aa15.81■□□□□ 0.12
HMGA2-211ENST00000545998 OR1L6Q8NGR2 347 aa15.81■□□□□ 0.12
HMGA2-211ENST00000545998 OR1N2Q8NGR9 330 aa15.81■□□□□ 0.12
HMGA2-211ENST00000545998 PALMDQ9NP74 551 aa15.81■□□□□ 0.12
HMGA2-211ENST00000545998 CYB5BO43169 146 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 NXPH3O95157 252 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 IL5P05113 134 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 TNFRSF9Q07011 255 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 ZNF616Q08AN1 781 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 EXOSC2Q13868 293 aaKnown RBP15.8■□□□□ 0.12
HMGA2-211ENST00000545998 SLC25A24Q6NUK1 477 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 OR1S1Q8NH92 325 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 MARVELD1Q9BSK0 173 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 ENY2Q9NPA8 101 aa15.8■□□□□ 0.12
HMGA2-211ENST00000545998 IGHV4OR15-8A0A075B7B6 117 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 A0A087WW49 117 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 HSPB1P04792 205 aaKnown RBP15.79■□□□□ 0.12
HMGA2-211ENST00000545998 WFDC9Q8NEX5 89 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 THYN1Q9P016 225 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 ANKRD34BA5PLL1 514 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 MPTX1A8MV57 137 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 INMT-MINDY4F8WBC2 141 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 LINC01619G3V211 115 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 IFNA21P01568 189 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 SPNP16150 400 aa15.79■□□□□ 0.12
HMGA2-211ENST00000545998 DNAH3Q8TD57 4116 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 CEBPZOSA8MTT3 80 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 SNCAP37840 140 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 BSXQ3C1V8 233 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 DPF1Q92782 380 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 CXorf58Q96LI9 332 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 RBKSQ9H477 322 aa15.78■□□□□ 0.12
HMGA2-211ENST00000545998 RANGRFQ9HD47 186 aaPredicted RBP15.78■□□□□ 0.12
HMGA2-211ENST00000545998 PEF1Q9UBV8 284 aaKnown RBP15.78■□□□□ 0.12
HMGA2-211ENST00000545998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.77■□□□□ 0.11
HMGA2-211ENST00000545998 MFSD2BA6NFX1 497 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 PTTG1O95997 202 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 TRBV12-3P01733 135 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 OR8U8P0C7N1 319 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 RNASE2P10153 161 aaKnown RBP15.77■□□□□ 0.11
HMGA2-211ENST00000545998 PVRIGQ6DKI7 326 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 C12orf45Q8N5I9 185 aaPredicted RBP15.77■□□□□ 0.11
HMGA2-211ENST00000545998 EEF1AKMT3Q96AZ1 226 aa15.77■□□□□ 0.11
HMGA2-211ENST00000545998 HEYLQ9NQ87 328 aaPredicted RBP15.77■□□□□ 0.11
HMGA2-211ENST00000545998 FAM90A26D6RGX4 464 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 PRAF2O60831 178 aa15.76■□□□□ 0.11
HMGA2-211ENST00000545998 IGHV3-23P01764 117 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms