RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 FAM25AB3EWG3 89 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 FAM25CB3EWG5 89 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 FAM25GB3EWG6 89 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 H2BFWTQ7Z2G1 175 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 AP3S1Q92572 193 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 SEC22AQ96IW7 307 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 C5orf66Q9H5L9 145 aa17.01■□□□□ 0.31
CHD4-214ENST00000545942 DYNC2H1Q8NCM8 4307 aaKnown RBP17.01■□□□□ 0.31
CHD4-214ENST00000545942 K7EIM0 57 aa17■□□□□ 0.31
CHD4-214ENST00000545942 M0QYG6 137 aa17■□□□□ 0.31
CHD4-214ENST00000545942 NDUFA4O00483 81 aa17■□□□□ 0.31
CHD4-214ENST00000545942 UBAC2Q8NBM4 344 aa17■□□□□ 0.31
CHD4-214ENST00000545942 OR1P1Q8NH06 330 aa17■□□□□ 0.31
CHD4-214ENST00000545942 OR4A16Q8NH70 328 aa17■□□□□ 0.31
CHD4-214ENST00000545942 CHRDL1Q9BU40 450 aa17■□□□□ 0.31
CHD4-214ENST00000545942 TENM2Q9NT68 2774 aa17■□□□□ 0.31
CHD4-214ENST00000545942 F8W735 103 aaPredicted RBP16.99■□□□□ 0.31
CHD4-214ENST00000545942 GABARAPO95166 117 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 IGKV1-39P01597 117 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 IGKV1D-39P04432 117 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 CTF1Q16619 201 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 Q56UQ5 140 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 IL17DQ8TAD2 202 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 SPAG8Q99932 426 aaPredicted RBP16.99■□□□□ 0.31
CHD4-214ENST00000545942 GAR1Q9NY12 217 aaKnown RBP16.99■□□□□ 0.31
CHD4-214ENST00000545942 KLK11Q9UBX7 282 aa16.99■□□□□ 0.31
CHD4-214ENST00000545942 RYR2Q92736 4967 aa16.98■□□□□ 0.31
CHD4-214ENST00000545942 RNASE10Q5GAN6 216 aaKnown RBP16.98■□□□□ 0.31
CHD4-214ENST00000545942 OR2C3Q8N628 320 aa16.98■□□□□ 0.31
CHD4-214ENST00000545942 MRGPRFQ96AM1 343 aa16.98■□□□□ 0.31
CHD4-214ENST00000545942 GGTLC1Q9BX51 225 aa16.98■□□□□ 0.31
CHD4-214ENST00000545942 NAA50Q9GZZ1 169 aaKnown RBP16.98■□□□□ 0.31
CHD4-214ENST00000545942 STARD9Q9P2P6 4700 aa16.98■□□□□ 0.31
CHD4-214ENST00000545942 LOC102724200A0A096LPH7 203 aaPredicted RBP16.97■□□□□ 0.31
CHD4-214ENST00000545942 ZNF182P17025 639 aaPredicted RBP16.97■□□□□ 0.31
CHD4-214ENST00000545942 ADMP35318 185 aa16.97■□□□□ 0.31
CHD4-214ENST00000545942 RNASE12Q5GAN4 147 aaKnown RBP16.97■□□□□ 0.31
CHD4-214ENST00000545942 LAMTOR1Q6IAA8 161 aa16.97■□□□□ 0.31
CHD4-214ENST00000545942 ZNF486Q96H40 463 aaPredicted RBP16.97■□□□□ 0.31
CHD4-214ENST00000545942 C20orf24Q9BUV8 137 aa16.97■□□□□ 0.31
CHD4-214ENST00000545942 CSMD3Q7Z407 3707 aa16.97■□□□□ 0.31
CHD4-214ENST00000545942 K7EMT4 169 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 TSPAN4O14817 238 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 SMIM18P0DKX4 95 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 PGAM2P15259 253 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 RND3P61587 244 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 PRCDQ00LT1 54 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 ARRDC1Q8N5I2 433 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 MISP3Q96FF7 219 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 EXTL2Q9UBQ6 330 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 SACSQ9NZJ4 4579 aa16.96■□□□□ 0.31
CHD4-214ENST00000545942 C15orf62A8K5M9 175 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 CD3DP04234 171 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 CTSGP08311 255 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 TBPP20226 339 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 HSPE1P61604 102 aaKnown RBP16.96■□□□□ 0.3
CHD4-214ENST00000545942 LHFPL1Q86WI0 220 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 ZNF114Q8NC26 417 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 OR52I2Q8NH67 350 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 MTFP1Q9UDX5 166 aa16.96■□□□□ 0.3
CHD4-214ENST00000545942 IGHV3OR16-8A0A075B7F1 116 aa16.95■□□□□ 0.3
CHD4-214ENST00000545942 NUPL2O15504 423 aaKnown RBP16.95■□□□□ 0.3
CHD4-214ENST00000545942 RELQ04864 619 aaPredicted RBP16.95■□□□□ 0.3
CHD4-214ENST00000545942 GPR107Q5VW38 600 aa16.95■□□□□ 0.3
CHD4-214ENST00000545942 C15orf40Q8WUR7 153 aa16.95■□□□□ 0.3
CHD4-214ENST00000545942 I3L2K1 104 aa16.94■□□□□ 0.3
CHD4-214ENST00000545942 ZNF207O43670 478 aaKnown RBP16.94■□□□□ 0.3
CHD4-214ENST00000545942 PI3P19957 117 aa16.94■□□□□ 0.3
CHD4-214ENST00000545942 FCGR2BP31994 310 aaPredicted RBP16.94■□□□□ 0.3
CHD4-214ENST00000545942 MFAP4P55083 255 aa16.94■□□□□ 0.3
CHD4-214ENST00000545942 PIGPP57054 158 aa16.94■□□□□ 0.3
CHD4-214ENST00000545942 TXN2Q99757 166 aa16.94■□□□□ 0.3
CHD4-214ENST00000545942 ERHP84090 104 aaKnown RBP16.93■□□□□ 0.3
CHD4-214ENST00000545942 TP53RKQ96S44 253 aa16.93■□□□□ 0.3
CHD4-214ENST00000545942 ABHD1Q96SE0 405 aa16.93■□□□□ 0.3
CHD4-214ENST00000545942 UBQLN2Q9UHD9 624 aa16.93■□□□□ 0.3
CHD4-214ENST00000545942 MT-CO2P00403 227 aa16.92■□□□□ 0.3
CHD4-214ENST00000545942 AKR1C2P52895 323 aa16.92■□□□□ 0.3
CHD4-214ENST00000545942 IZUMO4Q1ZYL8 232 aa16.92■□□□□ 0.3
CHD4-214ENST00000545942 OVOL2Q9BRP0 275 aa16.92■□□□□ 0.3
CHD4-214ENST00000545942 C3orf85A0A1B0GTC6 90 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 OR4C46A6NHA9 309 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 ATG12O94817 140 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 YIF1AO95070 293 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 IGKV1-5P01602 117 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 PPP5CP53041 499 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 TMEM229BQ8NBD8 167 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 TERB2Q8NHR7 220 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 ZFAND1Q8TCF1 268 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 PINX1Q96BK5 328 aaKnown RBP16.91■□□□□ 0.3
CHD4-214ENST00000545942 ZNF414Q96IQ9 312 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 SMPXQ9UHP9 88 aa16.91■□□□□ 0.3
CHD4-214ENST00000545942 CD74P04233 296 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 APOC4P55056 127 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 TAS2R19P59542 299 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 ODF3L2Q3SX64 289 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 OR4D10Q8NGI6 311 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 OR10C1Q96KK4 312 aa16.9■□□□□ 0.3
CHD4-214ENST00000545942 NXF2Q9GZY0 626 aaKnown RBP16.9■□□□□ 0.3
CHD4-214ENST00000545942 COPZ2Q9P299 210 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms